Gene Hhal_0778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0778 
Symbol 
ID4710636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp863690 
End bp864871 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content61% 
IMG OID639855239 
Productglycosyl transferase, group 1 
Protein accessionYP_001002358 
Protein GI121997571 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.272091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTCCAT TGGGTCTGAT CAGCGTCACC ACCTACTTTT CCAGAACTAG GGAGCACCAG 
TTGGCCTCCA CCATGAAAAG CGAATCGCAG ATTCCCCCAA TCGCCTTTTT CGTCCCCAGC
GTGATTGGCG GCGGCGCGCA GCGCGTCTTT GTCACATTGG CAAACACGCT CGTCGATATG
ACTGCGCACC CGATCCACTT GGTGGTCATC CGCGATGGCG GGGAGTTCTG GTCCGAAGTA
CGGCCTGAGG TGGAGATCGT CAACCTGGGG GCCAGCCGCA TGCGGTATGC CCTACCAGCG
CTCACTCGCT ACCTCCAGAC CGTGCGACCT CAGGCTCTGT GCTCGACACT CACCTACTGC
AACGTCGTCA CAATCCTCGC GTGGCGGTTG GCCGGGCGAC CATGCCGACT CCTCGTCCGC
GAAGCCAACG TCGTACGCAA GGAGGAGAGC GTCAGACGCG CCCTCATGCG CTTAACGTAC
CCCCAAGCCG ATCACGTCAT CGCGCTTTCG CCGGAGCTTC ATTCGAACAT CCTTGACGCC
AACGTCCCAG TGCGCGACAG CATCGCCACC ATCGGCAACC CCGCCCTGGA CTTTCAAGCG
ATCGAGCGCA CGACGGCGGC GCTTGACTTT TTGCCCCGGC CAAACCCCCG GTTCATTTGT
GCGGTCGGCA GTCTGACTTA TCAAAAAGGC TTCGACACGC TTCTCACGGC CTTCGCTCGG
CTGAGCGACA CTTCCGTACA CCTTGTCATT CTAGGGGAAG GAGAGCTACG TCCCTCCCTG
GAGGCACAAA GCGAGAAGCT GGGCATCGCT CACCGTGTGC ATCTCGTGGG GTTCGTTGCA
CGCCCGACCG ATATCGTTCA ACACGCATCC CTTTTCGTTT TGTCGTCCCG CTGGGAGGGC
TTCCCCAACG TGCTGCTTGA AGCCTTAGGG ACAGGGGTGC CGGTGGTCGC CACCGATTGC
CCCGGGGCCA ACCGTTCAAT ACTGCGAGAC GGCGAGCTGG GCCATCTTGC CGATCCAGAC
GACCCGGACG CGTTAGCCCA CTCCATCGCT GAGGCGTTGA CGGACCCAAG AGCGACTCCA
ACGGAGCGCC AAGAGCGCGC TCAGGAGTTT GCCGCGCCAA AGATCGCGCG CGAATATCTC
GACCTATTCG GTGCCGCATC CAAAACCGCG CCGGAACGCT AA
 
Protein sequence
MTPLGLISVT TYFSRTREHQ LASTMKSESQ IPPIAFFVPS VIGGGAQRVF VTLANTLVDM 
TAHPIHLVVI RDGGEFWSEV RPEVEIVNLG ASRMRYALPA LTRYLQTVRP QALCSTLTYC
NVVTILAWRL AGRPCRLLVR EANVVRKEES VRRALMRLTY PQADHVIALS PELHSNILDA
NVPVRDSIAT IGNPALDFQA IERTTAALDF LPRPNPRFIC AVGSLTYQKG FDTLLTAFAR
LSDTSVHLVI LGEGELRPSL EAQSEKLGIA HRVHLVGFVA RPTDIVQHAS LFVLSSRWEG
FPNVLLEALG TGVPVVATDC PGANRSILRD GELGHLADPD DPDALAHSIA EALTDPRATP
TERQERAQEF AAPKIAREYL DLFGAASKTA PER