| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0619 |
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| Symbol | |
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| ID | 4711443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 697188 |
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| End bp | 698150 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639855083 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_001002206 |
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| Protein GI | 121997419 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0887113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCACCC TCTACATCGA CCGGCGCCGG ACGCGCCTGG AGCTCGCGCA CAAGGCGCTC
ACCATTCGGG AACCGGAGGC CCAGCCCCGC TCGGTGCCGC TGAGCCTCAT CGACCGACTG
ATCGTCATTG GCCAGGTCGA GCTGAGCAGC GGCGTGCTCA CTACTCTCGC CGAGAGCGGC
GTCAGCCTGG TCTTCATGCC GAGCCGTGGA CAGCGGCGCA GCGCCTTCCT CCGCAGCGAG
GGCCATGGCG ATGCCGTCCG CCGCCTCGGC CAGTACAGGC TCATCCACCT CGAGGCTGAG
CGCCAGGCCT GGGCGCGCCG CCTCGTGCGA CTGCGTCTGG CCGGGCAGCA GCGGCTCCTC
GCGAGTGCGC TATACCGGCG TCCTGATCAA CGCCAGCCGC TCACGGCTGC CCACCGCGAG
ATCGAGGCGG CCCAGGCGAC CGTGCGCCGC GAGGCGCCCG CCGGTGAGCA ACTGCGGGGG
CAGGAGGGTA CGGCCGCGGC GGCCTTCTTC CGCGGCTACG GCGCTCTCTT CGCCGAAGCG
CTAGGCTTCT CCGGGCGAAA TCGCCGGCCA CCCCGGGATC CCGTCAACGC CGTCCTCTCG
CTCGGCTACA CCCTCGCGCA CGGCGATGCA CTGCGGGCCG TCACCGCTGC CGGCCTCGAT
CCGGCCATCG GCGTACTGCA CGAGCCTGCC TGGGGGCGAG ACTCCTTGGC CTGCGATCTC
ACGGAGATCG CCCGGGCCCG GGTGGAGCGG CTGACCTGGG AGCTATTCGC GAGCGAGACG
CTCCAGCGCA CGGACTTCAC CAACAGCACC GAGGGCGTAC GACTAGGCAA GGCTGCACGG
CAGACCTTCT TCGGCTGCTG GGAACGCCAT GCCGGGCTCC ATCGACGCTG GCAGCGCCGC
GCCGCTCAGG CCCTAGCCGC CGAGTGCGCC CACCACGGCG CCCAAACTAT TCCCGAGGCG
TAG
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| Protein sequence | MGTLYIDRRR TRLELAHKAL TIREPEAQPR SVPLSLIDRL IVIGQVELSS GVLTTLAESG
VSLVFMPSRG QRRSAFLRSE GHGDAVRRLG QYRLIHLEAE RQAWARRLVR LRLAGQQRLL
ASALYRRPDQ RQPLTAAHRE IEAAQATVRR EAPAGEQLRG QEGTAAAAFF RGYGALFAEA
LGFSGRNRRP PRDPVNAVLS LGYTLAHGDA LRAVTAAGLD PAIGVLHEPA WGRDSLACDL
TEIARARVER LTWELFASET LQRTDFTNST EGVRLGKAAR QTFFGCWERH AGLHRRWQRR
AAQALAAECA HHGAQTIPEA
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