| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0581 |
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| Symbol | |
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| ID | 4711304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 658219 |
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| End bp | 659055 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639855039 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001002169 |
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| Protein GI | 121997382 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.826332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGAGTG ACGGTGGGAA TCAACCCGCA GGGGAGAAAC TGCAGAAGGT GCTGGCGCGT
GCCGGGCTCG GCTCGCGCCG CGAGATGGAG GCGGCCATCC AGGCCGGACG CGTGCGCATC
GAGGGGCGTA CGGCCAAGCT CGGCGACCGC GCACGGCCCC GCGATCACGT GGAGCTGGAC
GGCCGCACGG TGCAGCGGGT CCACCGCGAG CCGCCGCGGC GGGTCCTGCT CTATAACAAG
CCCGAGGGCG AGGTGACCAC CCGCTCCGAT CCGGAAGGTC GGTCGACGGT CTTTGAGCGG
CTGCCGCGCA CGCCCGGGCG GTGGATCGCC GTCGGGCGGC TGGATATCAA CAGCCAGGGC
CTGCTCCTGT TCACCAATGA TGGCGAGTTG GCCAACGCCC TGATGCACCC CTCCACCGGT
GTCGAGCGCG AGTACGCCTG CCGGATCCAC GGTGAAGTCA CCGAGGAGAT GGTCCATCGG
CTGGTGGACG GCGTCGAGCT GGAGGACGGT CCCGCCCACT TCGAGGTCGT GGAGTCGGGG
ATGCCGGTGG ACGAACCCCA GGAGGGCACC AACGCCTGGT ACCACGTCAT TGTCACCGAG
GGCCGCCGCC GGGAGGTGCG CCGGCTATGG GAGTCGCAGG GGGTCACGGT CAGCCGCCTG
ATCCGCGTGC GCTACGGGCC CATGGTGATG CCACGGGATC TGCGCCGCGG CCAGTTGCGC
GAGCTGGATG AGGCCGGCAA GCGCGAGCTC TATGAGCACG TCGGTCTGAC CCCGCCGGAG
CCGGTCAGGC GGCCGGCCCC GCAGCGTCGC CGGCGGCGTG GGCGCAAGCG GCGTTGA
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| Protein sequence | MTSDGGNQPA GEKLQKVLAR AGLGSRREME AAIQAGRVRI EGRTAKLGDR ARPRDHVELD
GRTVQRVHRE PPRRVLLYNK PEGEVTTRSD PEGRSTVFER LPRTPGRWIA VGRLDINSQG
LLLFTNDGEL ANALMHPSTG VEREYACRIH GEVTEEMVHR LVDGVELEDG PAHFEVVESG
MPVDEPQEGT NAWYHVIVTE GRRREVRRLW ESQGVTVSRL IRVRYGPMVM PRDLRRGQLR
ELDEAGKREL YEHVGLTPPE PVRRPAPQRR RRRGRKRR
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