Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0554 |
Symbol | |
ID | 4709689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 626608 |
End bp | 628089 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639855012 |
Product | sodium/proline symporter |
Protein accession | YP_001002142 |
Protein GI | 121997355 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGGCG AACTCGATCT CAACATCCCG CTACTGGCGA CCTTTGTCGT CTACCTGATC CTGATGATCC TGGTGGGGCT GTTCGCCTAC CGCTTCACCA AGAGCCTCGC CGACTACATC CTCGGCGGGC GTCGCCTGGG TTCGGGGACG GCGGCCCTCT CGGCCGGCGC CTCGGACATG AGCGGCTGGC TCCTGCTTGG TCTGCCCGGT GCGGTCTACG CCTCCGGGAT GAACCAGATC TGGATTGCGG TGGGCCTGAC CATCGGCGCC TACCTCAACT GGCAGTTCAT TGCCGAGCGT CTGCGTCGCT ACACCGAGGT GGCGCGGGAC TCGATTACCA TCCCGGCCTA CTTCGAGAAT CGCTTCCGGG ACCAGACCTC GGCGCTGCGC GTGGTCTCGG CCCTGGTGAT CCTGCTGTTC TTTACCTTCT ACACCTCGGC CGGTCTGGTG GCGGCGGGGA CGCTGTTCGA GGACACCTTC GGGGTGGAGT ACACCCTGGC GCTGGCGATC GGCGCCTCGG TGATCCTGGT GTACACGCTG CTGGGCGGTT TCCTGGCGGT TAGCTGGACC GACTTCATCC AGGGCATCCT GATGTTCGTC GCCCTGATCC TGGTGCCGGT GATCACCGTG ATGAACCTCG GCGGCTGGTC GGAGACCGCC GGCGCCGTCG GGGAGCTGGA GCCGGGCGCG CTGGACGCCT TCCACGACGT GACCCTGTTC AGCATCATCT CGCTGATGGC CTGGGGCCTG GGCTACTTCG GGCAGCCCCA CGTGCTGACC CGTTTCATGG CCATCCGCAG TCCTCGGGAT ATCCCCGCGG CCCGGTTCAT CGGCATGAGC TGGATGGTCT TCGCCCTGTT CGGCGCCATC TTTACGGGCT TTGCCGGCAT CGCCTTCTTC GAGGGCACTG GCACCCTGGA CAACCCCGAG ACGGTCTTCA TGGCCCTGAT CCAGGCGCTG TTCAATCCGT GGGTGGCCGG CTGTCTGCTG GCGGCGGTGC TGGCGGCGAT CATGAGCACC ATCGACTCCC AGCTGCTGGT CTCCTCCTCG GCCCTGTCCG AGGACTTCTA CAAGCGCTTC CTGCGTCCGC GGGCCGGTGA CCGGGAGCTG GTCTGGGTCG GTCGCGGTAC GGTGCTCGGC ATCGGGATCT TCGCCACCCT GCTGGCGCTC AATCCGGATG CCGCGGTCCT CGACCTGGTC GCTTACGCCT GGGCCGGCTT CGGCGCTGCC TTCGGGCCGG TGATCATCCT CTCGGTCTTC TGGCGCGGTG CTACGCGCAA CGGGGCCCTG GCGGGGATCA TCGTCGGCGC GGTGACGGTG GTGGTCTGGG ATCTGCTTGA GGGCGGGCTC TTCGATATGT ACGAGATCCT GCCCGGCTTC ATCCTGGGTA CCCTGGCGAT CCTGATCTTC AGCCGCGTTG GTGGTCGTCC GAGTGCGGAG ATCGAGCGGG AGTTCGACAA GGTCGAACAA GGCACCCGCT AA
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Protein sequence | MNGELDLNIP LLATFVVYLI LMILVGLFAY RFTKSLADYI LGGRRLGSGT AALSAGASDM SGWLLLGLPG AVYASGMNQI WIAVGLTIGA YLNWQFIAER LRRYTEVARD SITIPAYFEN RFRDQTSALR VVSALVILLF FTFYTSAGLV AAGTLFEDTF GVEYTLALAI GASVILVYTL LGGFLAVSWT DFIQGILMFV ALILVPVITV MNLGGWSETA GAVGELEPGA LDAFHDVTLF SIISLMAWGL GYFGQPHVLT RFMAIRSPRD IPAARFIGMS WMVFALFGAI FTGFAGIAFF EGTGTLDNPE TVFMALIQAL FNPWVAGCLL AAVLAAIMST IDSQLLVSSS ALSEDFYKRF LRPRAGDREL VWVGRGTVLG IGIFATLLAL NPDAAVLDLV AYAWAGFGAA FGPVIILSVF WRGATRNGAL AGIIVGAVTV VVWDLLEGGL FDMYEILPGF ILGTLAILIF SRVGGRPSAE IEREFDKVEQ GTR
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