| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0543 |
|---|
| Symbol | |
|---|
| ID | 4710982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 612907 |
|---|
| End bp | 614091 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639855000 |
|---|
| Product | aminotransferase, class I and II |
|---|
| Protein accession | YP_001002131 |
|---|
| Protein GI | 121997344 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTTC AGCTTGCCGA TCGCGTCCAG CGCATCAAGC CATCGCCGAC GCTCGCCGTC
ACCGCCCGCG CCGCGGAGCT GCGCGCCGCC GGCCACGACG TCATCGGCCT CGGCGCCGGC
GAGCCGGACT TCGACACCCC GGCACACATC ATCGAGGCCG CCGTCCAGGC CGCCCAGCAG
GGGCAGACGC GCTACACCGC CGTGGACGGC ACCACCGAAC TCAAGCAGGC GGTCATCGAC
AAGCTCCAGC GCGACAACCA GCTGAGCTAC GAAGCCAACC AGATCCTGGT CTCCAGCGGC
GCCAAGCAGT CGCTGTTCAA CGCCATGGCC GCCGTCCTCA ACGAGGGCGA CGAGGTGGTC
ATCCCGGCGC CCTACTGGGT CTCCTACCCG GACATGGCCC TGGTCTTCGG CGCACAGCCG
GTCTTCGTGG CCGCCGGTGC CGAGAGCCGT TTCAAGATCA CCCCGGAGCA GCTTGAGCAG
GCGCTGACCC GCAAGACCCG CATGGTCATC CTCAACAGTC CGTCCAACCC CACCGGCACC
GCCTACACCC GGGACGAGCT GGCGGCGCTG GGCGCGGTCC TCGAGCGCCA TCCGCAGGTC
GTGGTGGTCA GTGACGACAT CTACGAGCAC ATCCTCTGGC GCGACGAGGC TTTCTCCAAC
ATCGCCATGG CGGCACCGCA GCTCTTCGAG CGGACCATCG TGGTCAACGG CGTCTCCAAG
GCGTACGCCA TGACCGGCTG GCGTATCGGC TACGCGGCCG GCCCGGCCCC GCTGATCGGC
GCCATGAAGA AGGTGCAGTC GCAGAGCACA TCCAACCCGG CCTCGATCTC TCAGGCCGCT
GCGCTGGCCG CCCTCAACGG CGATCAGGGC TGCATCCAGC CCATGCTGGA GCAGTTCAAG
GCGCGCCACG ATTTCGTCGT CGAGCGCCTC AACGCCATGC CGGGGGTAAG CTGCACGCCG
TGCGACGGCA CCTTCTACTG CTTCCCGCAC ATGGAAGAGG CCATGAACCG CACCGGCGCC
GAGGACGACG TCGCCTTCGC CGAGCAGCTG ATCAACGACG CCGGTGTAGC CCTGGTGCCG
GGCTCGGCCT TCGGCCTGCC GGGATACGCC CGCATCTCTT ATGCGACCAG CATGGAGAAC
CTGGAGCGGG CCATGGATCG GCTGCAGCAA GCCCTGGGCG GCTGA
|
|---|
| Protein sequence | MDLQLADRVQ RIKPSPTLAV TARAAELRAA GHDVIGLGAG EPDFDTPAHI IEAAVQAAQQ
GQTRYTAVDG TTELKQAVID KLQRDNQLSY EANQILVSSG AKQSLFNAMA AVLNEGDEVV
IPAPYWVSYP DMALVFGAQP VFVAAGAESR FKITPEQLEQ ALTRKTRMVI LNSPSNPTGT
AYTRDELAAL GAVLERHPQV VVVSDDIYEH ILWRDEAFSN IAMAAPQLFE RTIVVNGVSK
AYAMTGWRIG YAAGPAPLIG AMKKVQSQST SNPASISQAA ALAALNGDQG CIQPMLEQFK
ARHDFVVERL NAMPGVSCTP CDGTFYCFPH MEEAMNRTGA EDDVAFAEQL INDAGVALVP
GSAFGLPGYA RISYATSMEN LERAMDRLQQ ALGG
|
|---|
| |