| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0522 |
|---|
| Symbol | |
|---|
| ID | 4710774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 593585 |
|---|
| End bp | 594520 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639854980 |
|---|
| Product | putative CheW protein |
|---|
| Protein accession | YP_001002111 |
|---|
| Protein GI | 121997324 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0835] Chemotaxis signal transduction protein
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGAA TCATGAGCTC CGTCGACCAG CGGACCCAGC TGGCCGGCCA TAACCGCATG
GAGTTGCTGC TCTTCCGCTT CGAGGGGCGG CAGCGCTACG GGATCAACGT GTTCAAGGTC
CGCGAGGTCA TTCCCGCGCC GGAGCTGAGC TACGTGCCCC ACGCCCATCC GGCCTCCTGC
GGCATCGCCT ACATCCGCGG CCACACGCTC TCGGTTCTGG ACCTTAGCTA CGCCACTGGT
AACGGTCCCG TCACCAAGGA AGAGGGCAAC TACATCATCG TCACCGAGTA CAACCGTCAG
GTCCAGGGGT TCCTGGTCGG CGGTGTGGAC CGGATCGTCA ACATCAACTG GCAGGATGTC
CTTCCGCCGC CGAGTGGCGG CAGCGCCGGC AGCTACCTGA CCGCCGTGGC GCGCTACGAT
GGACAAATGA TCCAGATCGT CGACGTCGAG AAGGTCCTGG CCGAGGTCCA GCGCGCCGGC
GGCGCCGATC CCGAGGTCAC CGAGGGCGGC GGTGTGGATC GTGCCGAGGG GTCTGAGGCT
TACAAGGTCC TGGTGGTGGA CGACTCGGCG GTGGCTCGGG GGCAGATCAA ACGCACCCTC
GAGGAGATCG GCGTGCGCGT AGTCACCAAG AACAACGGGC GCGAAGCGCT GGAGCAGCTG
CGCGCCTGGA AGGACCAGGA CCCCTCGGGG CTCCGCGATC TGCTGATGGT GGTCTCCGAT
ATCGAGATGC CGGTGCTCGA CGGCTATACC CTGACGCGCT CCATCCGGCA GGATCCGGGG
CTTTCCGGGG TTCACGTCTT GCTCCACTCC TCGCTCAGCG GTGTGTTCAA CACCGAGATG
GTGCGCCGGG TGGGAGCCGA CGAGTTCCTG GCCAAGTTCC ACTCCCAGGA GCTGGCCGAG
CGGGTCGGCG CCCGGCTGGC CGAGCGAGGT GGGTGA
|
|---|
| Protein sequence | MAGIMSSVDQ RTQLAGHNRM ELLLFRFEGR QRYGINVFKV REVIPAPELS YVPHAHPASC
GIAYIRGHTL SVLDLSYATG NGPVTKEEGN YIIVTEYNRQ VQGFLVGGVD RIVNINWQDV
LPPPSGGSAG SYLTAVARYD GQMIQIVDVE KVLAEVQRAG GADPEVTEGG GVDRAEGSEA
YKVLVVDDSA VARGQIKRTL EEIGVRVVTK NNGREALEQL RAWKDQDPSG LRDLLMVVSD
IEMPVLDGYT LTRSIRQDPG LSGVHVLLHS SLSGVFNTEM VRRVGADEFL AKFHSQELAE
RVGARLAERG G
|
|---|
| |