| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0501 |
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| Symbol | |
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| ID | 4710277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 570113 |
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| End bp | 571513 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639854959 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001002090 |
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| Protein GI | 121997303 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTCCAGG TTCTGGTCGT CGACAGTGAC GCGGAGCGTC GTTGGGGTAT CGAGACGGTG
CTCCAGTTCC TTGAACACGA ACCTATCCCC GCCGAAGTCA CCGACGCCGG CAGCACAGCC
ACCCATTATT CCGGCCTGGC CATGGCCCTG GTCGGTATCG ATGGCAACGA GCGAAGCTGT
CTGCAGCGGC TCATCGACAG CCGCCCCGAA CTCCCGGTCT TCCTGGTGGC CCCGGATGCG
GACGCCCGTC GCCGCGGCGG CGATATCCAG CACGGGGTGC TCGGGGTCCT CGACCTGCCC
CTGCGCCAGG GGCAGCTCAC CGCTGCCCTG CGTCAGGCGC TCAGCCACAA CATTCGCCAC
CGCGAGCACG GCGGTGCCGG CCGGGCGCCC CGGCTCGCCG GCGAAAGCCG CGGTGTGCAG
CGGGTGGCCA GCCTCATCGA GCAGGTGGCT GATACCGATG CCAGCGTGCT GATCCTCGGC
GAGTCCGGGA CCGGCAAGGA GGTGGTGGCA CGGAATATCC ACGCCCGCTC CTCCCGCCGA
ACCCGCCCCT TTGTGCCGAT CAACTGCGGG GCCATCCCCG CCGAGTTGCT CGAGAGCGAA
CTCTTCGGCC ACGAGAAAGG GGCGTTCACC GGCGCCATCA GTGCCCGGCA GGGCCGCTTC
GAGATGGCCC AGGGCGGGAC CGTCTTCCTC GATGAGATCG GGGACATGAG CATGCACATG
CAGGTGAAGC TGCTGCGCGT GCTCCAGGAG CGGACCTTCG AGCGGGTCGG CTCCAACAAG
CCCATCCACG CGGATGTCCG GGTGATCGCC GCCACCCACC GCAATCTCGA TACCGGCATC
CGTGACGGCA GCTTCCGTGA GGACCTGTTC TACCGGCTCA ACGTCTTCCC CATCGAGATC
CCGGCCCTGC GCGAGCGCTC GGGGGATATC CCGGTGCTGG TCGAGGAGAT CATCCGCCGG
ATCGAGGACG AAGGGCGGGG GTCGGTCCGG GTCAGCCCGG CGGCCATGTC CTGCCTCTCG
GCGTACCATT GGCCGGGCAA CGTGCGCGAG CTGGCCAACG TGGTCGAGCG TCTGGCCATC
CTCTGCCCCT ACGGTGAGGT GGGGGTCGAA GACCTGCCCA AGAAGATCCG CGATGCCGCC
CGTGAGGAAC TCGATAGCGG TGATGGGGCG GCGGCTGCGG CGGAGCCCGT CAACGGTCAG
GCGGGGGTGC CGCTGCCGGC GGTGGACTGG TCCGAGGGCA TCGACCTCAA GGGGTACCTG
ACCGAGGTGG AGCAGGAGTT GATCCGTCAG GCCCTGCAGA CCACCGACGG CGTGGTAGGG
CGCGCCGCAC GACTCCTCGG GCTGCGCCGC ACCACCCTGG TCGAGAAGCT GCGCCGGCTC
GACGTGGAGC GCCCCGCCTG A
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| Protein sequence | MVQVLVVDSD AERRWGIETV LQFLEHEPIP AEVTDAGSTA THYSGLAMAL VGIDGNERSC
LQRLIDSRPE LPVFLVAPDA DARRRGGDIQ HGVLGVLDLP LRQGQLTAAL RQALSHNIRH
REHGGAGRAP RLAGESRGVQ RVASLIEQVA DTDASVLILG ESGTGKEVVA RNIHARSSRR
TRPFVPINCG AIPAELLESE LFGHEKGAFT GAISARQGRF EMAQGGTVFL DEIGDMSMHM
QVKLLRVLQE RTFERVGSNK PIHADVRVIA ATHRNLDTGI RDGSFREDLF YRLNVFPIEI
PALRERSGDI PVLVEEIIRR IEDEGRGSVR VSPAAMSCLS AYHWPGNVRE LANVVERLAI
LCPYGEVGVE DLPKKIRDAA REELDSGDGA AAAAEPVNGQ AGVPLPAVDW SEGIDLKGYL
TEVEQELIRQ ALQTTDGVVG RAARLLGLRR TTLVEKLRRL DVERPA
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