Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0358 |
Symbol | |
ID | 4711318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 415043 |
End bp | 416020 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639854821 |
Product | TRAP transporter solute receptor TAXI family protein |
Protein accession | YP_001001954 |
Protein GI | 121997167 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0105489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATCA AGACCTGGAA CATTGCCATC TGCGCCACCT CGGCGCTGGC GCTCTCGGCG CCGGCCCTGG CCGACCGCGA CGACTGGCCG CGCAGCTTCA CCGTGGGCAC CGCCAGCCAG GGCGGCACCT ACTACATCTA CGGCAGCGGC TGGGCCGATA TGGTCGCCGG TATGCTCGAC GTCCGCGCCG GCGGCGAGGT CACTGGCGGG CCGGTGCAGA ACGCCACCCT GGTGGAGACC GGCGACCACG AGTTCGGCCT GGTGACCATG GGGCCGGCCC GCGCCGCCTG GGACGGCGAG AGCGAACTCG CCCCCGGCAT GGAGCACAAG AACATCCGCG CGGTCTTCCC GATGTACCAG ACCACCTTCC ACATCATCAC CCGCGAGGGC GATGACCTCA CCTCCATGGA GGATCTGGAA GGCAAGCGCG TCGGGGTGGG GCCGTCCGGC GGCACCGCCG ACATGTACTT CCCGCAGTTC TTCGATGAGC TGGGCATCGA TGTGCGCGTG CGCAACGGCG GCGCCTCGGA CCTCGCCGGG CAGCTGCAGG ACGGGCTGAT CGACGCCTTC GCCTTCGCCG CGGGCACCCC GATCTCGGCG TTCTCGCAGC TCGAGGCGGA GATCGACACC AACATCTTCT CGGTCACCGA GGCGCAGCAG GAGCAGCTGC TGGAGGCCTT CCCGGCCCTG GCACCGGCGG ACATCGAGGC GGACCTGTAC GGCTCCCTGG ATGAGGATAC GCCGGCGATC TCCATCTGGA ACTTCGCCAT CACCCACCAG GACATGCCCG AGTCGCTGGT CTACGAGGTG ACCAAGGCGG TCATGGAGAA CCACGACCGG ATGATGGACA TCCACCGGGC CGCCCGCGAG ACCCTGCCGG AGAACCACGA GTTCAACGAC TGGATGCCCT GGCACCCGGG CGCCGTGCGC TGGTTCGAGG AGAACGGCTA CGAGATCTCC GAAGACCTGC GCGGCTGA
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Protein sequence | MRIKTWNIAI CATSALALSA PALADRDDWP RSFTVGTASQ GGTYYIYGSG WADMVAGMLD VRAGGEVTGG PVQNATLVET GDHEFGLVTM GPARAAWDGE SELAPGMEHK NIRAVFPMYQ TTFHIITREG DDLTSMEDLE GKRVGVGPSG GTADMYFPQF FDELGIDVRV RNGGASDLAG QLQDGLIDAF AFAAGTPISA FSQLEAEIDT NIFSVTEAQQ EQLLEAFPAL APADIEADLY GSLDEDTPAI SIWNFAITHQ DMPESLVYEV TKAVMENHDR MMDIHRAARE TLPENHEFND WMPWHPGAVR WFEENGYEIS EDLRG
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