Gene Hhal_0310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0310 
Symbol 
ID4711244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp349063 
End bp350562 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content73% 
IMG OID639854770 
Producthypothetical protein 
Protein accessionYP_001001906 
Protein GI121997119 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCCAC CGGTCAGTGC GCTCGACAGC CTCCCCTGGG AGGCCACCTA CGCCGCGTTG 
CCCGCAGCGT TCCACGTCCG GCTCGAACCT ACGCCGGTGG GCCACCCCCG GTGGGTGCAG
CTCAACCTCC CGCTGGCCCG GCAGCTCGGA CTGGATCCAG AGCGGCTGAC GACCCCCGAG
GCGCTGGCGG TCTTCGCCGG CAACCGCGTC CCCGCCGGGG CCGACCCCAT CGCGCAGGCC
TACGCCGGTC ACCAGTTCGG ACACTTCGTC CCGCAGCTCG GCGACGGCCG GGCGCTGCTG
CTCGGCGAGC TGATCGATGT CGATGGGGTG CGTCGGGATA TTCAACTCAA GGGGGCGGGG
CGAACGCCTT TCTCCCGGGG CGGGGACGGG CGATCGCCCA TCGGCCCGGT GGTCCGGGAG
TATCTGGCCA GCGAGGCCAT GGCCGCCCTG GGGGTGCCCA CCACCCGCTC CCTGGCGGCG
GTGGCCACCG GCGAGACCGT CTGGCGCCAG GGCCCGGAGC CCGGGGGCGT GCTCACCCGG
GTGGCGGCCA GCCACGTGCG CGTGGGCACC TTCGAGTATT TCGGCCAGCG CGGTGATCGC
AGCGCGCTGC GCCGGCTGGC CGACTACGTG CTCTACCGTC ACTATCCGCA CTGTGCCCAG
GCGCCGCGGC CGCATCAGGC GCTACTGGAG GCGGTGGCCG CCGCCACCGC GGAGCTGATC
GCCGCCTGGA TGCATATCGG CTTCATCCAC GGGGTAATGA ACACCGATAA CCTCTCCGTC
GCCGGCGAGA CCATCGACTA CGGGCCCTTC GGTTTCCTCG ACGCCTTCGA CCCCGCCACC
GTCTACAGCT CCATCGACCG TTTCGGCCGC TACGCCTTCG ATCAGCAGCC GGCCATCGGC
GAGTGGAACC TGGCGCGCCT GGCCGAGGCC CTCCTGCCGC TGCTCGATGA CGACCCGGAC
ACCGCCGTCG ATCTCGCCCG TGAGGCGCTG AGCGGCTACC GGCCGCGCTT CGAGGCGGCG
CACCGCGCCG GACTCCGGGC GAAGATCGGG TTGGCCGAGG AGCGCCCCGG CGACGACGAT
CTGGTCCACG ACCTGCTCCG GCGCATGGCC GCCGAGGGGG CGGACTGGAC CCTGACCTTC
CGCCGGCTCA GCGATCTCGA CGGCGCCGAT GCCCGGGGCG ATGAGCCGTT CCGGGGCGGC
TTCCGGGATC CACAGGCTGC CGACGACTGG CTGGCGGCCT GGCGGGGGCG GCTGATGGCC
GAGCGCCGCA GCGATGCCCA GCGCCGTGCG GCTATGCGAG CGGTCAACCC CGCCTTCGTC
CTGCGCAATC ACCTGGCGCA GTGGGCGGTG GACGCCGCCA CCGAGCGCCT GGACTTCGCC
CCCATGGAGC GGCTGCTGGT GGTGCTCGGC GACCCCTTCT CGGATCAGCC GGAGCACGCC
GATCTGGCCC GTCCCCCAGA GCCGGGGCAG GCCGTGACCC GCACCTTCTG CGGGACTTGA
 
Protein sequence
MHPPVSALDS LPWEATYAAL PAAFHVRLEP TPVGHPRWVQ LNLPLARQLG LDPERLTTPE 
ALAVFAGNRV PAGADPIAQA YAGHQFGHFV PQLGDGRALL LGELIDVDGV RRDIQLKGAG
RTPFSRGGDG RSPIGPVVRE YLASEAMAAL GVPTTRSLAA VATGETVWRQ GPEPGGVLTR
VAASHVRVGT FEYFGQRGDR SALRRLADYV LYRHYPHCAQ APRPHQALLE AVAAATAELI
AAWMHIGFIH GVMNTDNLSV AGETIDYGPF GFLDAFDPAT VYSSIDRFGR YAFDQQPAIG
EWNLARLAEA LLPLLDDDPD TAVDLAREAL SGYRPRFEAA HRAGLRAKIG LAEERPGDDD
LVHDLLRRMA AEGADWTLTF RRLSDLDGAD ARGDEPFRGG FRDPQAADDW LAAWRGRLMA
ERRSDAQRRA AMRAVNPAFV LRNHLAQWAV DAATERLDFA PMERLLVVLG DPFSDQPEHA
DLARPPEPGQ AVTRTFCGT