Gene Hhal_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0198 
Symbol 
ID4711028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp230799 
End bp231311 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content65% 
IMG OID639854656 
Productankyrin 
Protein accessionYP_001001794 
Protein GI121997007 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0147609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGTGGA TACAGCAGCA AATCGCAGAT CATCCCTTTC GGGTGCTGGT CCTGGTGCTG 
GTGGTCATCG CGCTGGTTCG CGCGATCCCG GATCCGGAAG CCCGCGACGC GCATGGCCGC 
ACTCCGCTTG TTGCCGCGGC GTACGAAGGG AACCTCGGTA TGGCTCGAAT GTGGTTGCTG 
CTCGGTGGGG ACATCGATGT GGAAGAGCCA TGCGGTACAA CCGCACTGAT GCGGGCAATT 
CAGCATGGGC ATACGGAGAT GGCCAATTGG TTGTTAGACC GCGGCGCGGA TCCGGCTGCA 
AAGGACGAGA CAGGACTCAG CGCGCTGCAT CTGGCCGCCC GGAAGGGCGA GCGAGACCTT 
GCGGAGCGGT TGGTCGAGGG CGGGGCCGAC CCCGAACTCG CGGATGCTGT TCACGAGCGG 
GATGCCATCG AAGAGGCTGA CGATGCCGGC TACGAAAGGC TGGCCGAGTA CCTGCGCGAT 
ACCACCGATC GGGATGGCCG CGCCGACCCC TGA
 
Protein sequence
MRWIQQQIAD HPFRVLVLVL VVIALVRAIP DPEARDAHGR TPLVAAAYEG NLGMARMWLL 
LGGDIDVEEP CGTTALMRAI QHGHTEMANW LLDRGADPAA KDETGLSALH LAARKGERDL 
AERLVEGGAD PELADAVHER DAIEEADDAG YERLAEYLRD TTDRDGRADP