Gene Hhal_0166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0166 
Symbol 
ID4710832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp195284 
End bp195907 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content71% 
IMG OID639854624 
Producthypothetical protein 
Protein accessionYP_001001762 
Protein GI121996975 
COG category[S] Function unknown 
COG ID[COG3521] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03352] type VI secretion lipoprotein, VC_A0113 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTGG ACCGCAGGAA GGCGGTTCGG GGTGATCGCC GCCCCGGGCG CTCCCCGTGC 
GCCGGCTCCG CCCCCGCACG ACGTTCGCTG ATACCCTCCG TTACGGCTCG CCCCCTTGGC 
TGGGGTGTGG CACTGCTCCT GTGTGCCTGG GCGGCAGCAG GGTGTACGCC CCGGGTCGAA 
CTCGACATGA CCGCCGGGCC TCAGCTCAAC CCTGGACCGC AGGGGGAACC GCTCTCGGTC 
CTCCTGCGAG TCTATCAGCT CGACGACCGC ACGCCCTTCG AAGACGCGGA CCGCGCGGCA 
CTGACCCGGG ATGACCGCGC CGCGCTGGGC GGCTGGGAGC AGCGGCGCGA GCTGGTCCTG 
CAACCCGGCG AGCGCAAGGA AGTCGAGCTG GAGATGGCCG ACCCGGCCGG TTATCTGGCA 
GTGGCCGTCT TCTACCTCGA TGAGCAGGCC GAGCGCTGGC GTCTCCTGGA GCCTTTGCCG 
GAATCCTTCC TGGGGATGCG CCCCGGCCAG AGGATCACCC TGGCGCTGGA TGGGGGTGCG 
CTGTGGGCGG GCAGCGAGGC CGAGCGCAGG CGCGCCGCCT GGCAGCGGGA GGATGTCGCC 
GGGCAGCGTT CGGCAGGGCT TTGA
 
Protein sequence
MDVDRRKAVR GDRRPGRSPC AGSAPARRSL IPSVTARPLG WGVALLLCAW AAAGCTPRVE 
LDMTAGPQLN PGPQGEPLSV LLRVYQLDDR TPFEDADRAA LTRDDRAALG GWEQRRELVL 
QPGERKEVEL EMADPAGYLA VAVFYLDEQA ERWRLLEPLP ESFLGMRPGQ RITLALDGGA 
LWAGSEAERR RAAWQREDVA GQRSAGL