| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0160 |
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| Symbol | |
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| ID | 4710589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 186157 |
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| End bp | 187671 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639854618 |
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| Product | hypothetical protein |
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| Protein accession | YP_001001756 |
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| Protein GI | 121996969 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.586065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAGC AGACGAGCGC AGATAGGGCC GCAGAAGCCA CGGCCCCGGC GGCAAGCTAT
GCGCACCTGT GCCAGCTGGC CGAGGTCGAG CCGGTCTCCG GCGCCCTGGA GATCGCCACC
TTCCAGGACT CGGCGGTCAT GGCGGACATC CCCTCGGAGA GTCGATTGAC CGCTGCCCTG
CAGGTGTTCC TGGATCTCGC CAGTCAGGAC GGCGAGCTGG TCGAGCGCAT CGACAAGGCG
TTGCTCGACG AGTATATCGC CCGCATCGAC GCGGCGGTGA GCGAGCAGCT CGACGCCGTC
CTGCACCATC CGGAGTTCCA GCGGGTGGAG TCGGCCTGGC GCAGCCTGCG TTTCCTCGTC
GAACGCAGCG ATCCCAAGGC GAACATCAAG CTGGAGCTGC TCGATGTCTC CAAGGAAGAG
CTGGCCGGCG AGCTCGAGGA TGTCACTGAC ATCACCCAGT CCGGCCTGTA CCAGCACGTC
TATGTGCAGG AGTACGACAC CCCGGGCGGG GAGCCCTTAG CCGCCATGGT CTCCAACTAT
GAGTTCGACT GCTCGGCGGC GGACATCAAC CTGCTGACCG AGGTATCCCG GATTGCGGCG
GCGGCCCACT GTCCCTTCCT CGGTGCCGTC GGCCGGGACT TCTTCGGCAA GGCCTCCCTG
GATGAGGTGG TCCGGATCCC GGATATCGCC AGCTATCTAG ATAAGGCCGA GTACGCCCGC
TGGCGCGGGT TCCGCGACAC CGAAGACGCT CGGTACGTCG GCCTCACCCT GCCGCGGTTC
CTGCTGCGCC TGCCCTACGG GGCCGACAAC CCCACCCGTG CGTTCGACTA CCGCGAGAAC
GTCACCGGGG TCGATCACGA TCGCTACCTT TGGGGGAATG CAGCCTTCGC CTTTGCCGCC
AACATGGCCC GTTCCTTCAA GGCCTACGGG TGGACGGTCA ATATTCGCGG GCCGGAGTCC
GGCGGCAAGC TCGAGCAGCT GCCGATCCAC GTCTTCGACC TCGGCCGTGG GGCGCAGACC
AAGACCCCCA CCGAGGTGCT CATCTCCGAG AACCGCGAAA TCGAGCTGGC CGAGGCCGGA
TTCATCCCGC TGAGCTTCTA CAAGAACAGC GATTACGCCT GCTTCTTCTC GGCCAACTCG
GCGCAGCGTC CGGCCCGCTA CAACAGTCCC GCGGCGACGG CGAATGCCCG GATCAACGCC
CGGTTGCCGT ACATCTTCCT GGTCTCCCGT CTGGCTCACT ATCTCAAGGT GCTGCAGCGG
GAGAATATCG GCTCGGCCAA GAGCCGGCAG GACCTGGAAA ACGAGCTCAA CGATTGGCTG
CAGGGGCTGG TGACCAAGAT GCAGAATCCG GATCCCGATC TGGTCGCTAC CCGCCCGCTA
CGCGAGGGGG TGGTGGAGGT CGAGGAGGTC CCCGAAAACC CGGGCTTCTA CCGGGTCAAC
ATGTCGGTGA TGCCGCACTT CCAGATCGAG GGTATCGACC TGAAGCTCTC GCTGGTGTCG
CAGTTGCCGA CCTGA
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| Protein sequence | MSEQTSADRA AEATAPAASY AHLCQLAEVE PVSGALEIAT FQDSAVMADI PSESRLTAAL
QVFLDLASQD GELVERIDKA LLDEYIARID AAVSEQLDAV LHHPEFQRVE SAWRSLRFLV
ERSDPKANIK LELLDVSKEE LAGELEDVTD ITQSGLYQHV YVQEYDTPGG EPLAAMVSNY
EFDCSAADIN LLTEVSRIAA AAHCPFLGAV GRDFFGKASL DEVVRIPDIA SYLDKAEYAR
WRGFRDTEDA RYVGLTLPRF LLRLPYGADN PTRAFDYREN VTGVDHDRYL WGNAAFAFAA
NMARSFKAYG WTVNIRGPES GGKLEQLPIH VFDLGRGAQT KTPTEVLISE NREIELAEAG
FIPLSFYKNS DYACFFSANS AQRPARYNSP AATANARINA RLPYIFLVSR LAHYLKVLQR
ENIGSAKSRQ DLENELNDWL QGLVTKMQNP DPDLVATRPL REGVVEVEEV PENPGFYRVN
MSVMPHFQIE GIDLKLSLVS QLPT
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