Gene Hhal_0153 details

Gene Information

• Locus tag: Hhal_0153
• ID: 4711411
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 176702
• End bp: 178519
• Gene Length: 1818 bp
• Protein Length: 605 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 639854611
• Product: GTP-binding protein TypA
• Protein accession: YP_001001749
• Protein GI: 121996962
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.143377
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCGAAA ACCTCCGCAA CATCGCCATC ATCGCCCACG TCGATCACGG CAAGACGACC 
CTGGTCGATC AGCTGCTCCA GCAGTCCGGC ACCCTCGACG CCCGCGGCGG AGACGCCGAG 
CGGGTGATGG ACAGCGACGA CCTCGAGCGC GAGCGGGGCA TCACCATCCT CTCCAAGAAC 
ACCGCCATTG ACTGGCAGGG GTATCGGATC AACATCGTCG ATACCCCCGG CCACGCGGAC 
TTCGGCGGCG AGGTGGAACG GGTGCTCTCC ATGGCCGACT CCGTCCTTCT GCTCGTCGAT 
GCCCAGGACG GTCCGATGCC GCAGACCCGC TTCGTCACTG AGAAGGCGTT CGCCCTCGGC 
CTACAGCCGA TCGTCGTGGT CAACAAGATC GACCGCCCCG GCGCACGGCC CAACTGGGTG 
ATCGATCAGA CCTTCGACCT GTTCGCCGAT CTGGGCGCCA CCGAGGAGCA GCTGGATTTT 
CCGGTGATCT ACGCCTCGGC CCTGGGCGGC TACGCCGGCG AGGAGCCGAA CATCGACAGC 
GGCGATATGA CCCCGCTGTT CCAGACCATC GTCGATCAGG TGCGCCCGCC GCAGGTGGAC 
AGCGACGGCC CCTTCCAGAT GCAGATCACC ACCCTGGACT ACTCCAAGTA TCTGGGCCAG 
ATCGGCATCG GCCGGATCAA GCGGGGCCAG GTCACGCCGG GTACCTCGGT CACCGTGGTC 
GACCGGGAAG GCAACGAGCG CAGCGGGCGC GTCCAGACCC TGCTCGGCTT TCTGGGCTTG 
GAGCGGGTCG AGATCGAGTC CGCCGATGCG GGCAACCTGG TGGCCATCAC CGGCATCGAT 
CCGCTGGATA TCTCCGATAC CCTGTGCGAC CCACAGCAGG TCGAGGCCCT GCCGGCGCTG 
ACCGTGGACG AGCCGACGGT GAGCATGGGC TTCGAGGTCA ACAAATCACC GTTCGCCGGC 
CGCGAGGGGC GCTACGTGAC CAGCCGCCAG ATCCGCGAGC GTCTCGACCG GGAGCTCAAG 
TCCAACGTCG CGCTGCGCGT CGAGGCCACC GACGATCCGG ACCGCTTCCA CGTCTCCGGC 
CGTGGGCTCC TGCACCTGTC CGTGGTACTC GAAAACATGC GCCGCGAAGG CTACGAGATT 
GCCGTCTCGC GCCCGGCCGT GATCACCCGC ACGGGCGAGG ACGGGCGCAC CGAGGAGCCG 
TACGAACACC TGGTCGCCGA CATCGAGAGC GATCACCAGG GCGCGGTCAT CGATGCCCTC 
AACGAACGCG GCGGCCGCCT CCAGGACATG CAGGTCGACA GCAATGGCCG CGTCCGCCTG 
GAGTACACCA TCCCGGCGCG GGGGCTGATC GGTTTCCAGA CGGATTTCAT GAGCCTCACC 
TCCGGGACCG GCATCCTCAC CCACGTCTTC GACCACTACG GCCCCCGCAG CGACAAGGAG 
GTTGGCCAGC GCCGCGAGGG CGCGATGATC TCCGGCAACG ACGGCAAGGC GGTGGCCTAC 
GCCCTGTTCA ACCTGCAGGA GCGGGGGCGG CTGATGGTCT CGCCCAACGA CCCCGTCTAC 
GAGGGCATGC TCATCGGCCT GAACAGCCGT GACGCGGACA TGACGGTCAA CCCGCTGAAG 
GCCAAGGAGC TCACCAACGT CCGGGCGGCC GGCAGCGACG AGAACGTGAT CCTCACCCCG 
CCCATGCAGC TGACGCTGGA GTACGCCCTG GAGCTGATCA ACGACGACGA GCTGGTCGAG 
ATCACACCGC AGTCGATCCG CCTGCGTAAG CGGCTGCTGA CCGAGAGCGA GCGTAAGCGC 
CACAAGCGGG CGAGCTAA 

 

Protein sequence

MVENLRNIAI IAHVDHGKTT LVDQLLQQSG TLDARGGDAE RVMDSDDLER ERGITILSKN 
TAIDWQGYRI NIVDTPGHAD FGGEVERVLS MADSVLLLVD AQDGPMPQTR FVTEKAFALG 
LQPIVVVNKI DRPGARPNWV IDQTFDLFAD LGATEEQLDF PVIYASALGG YAGEEPNIDS 
GDMTPLFQTI VDQVRPPQVD SDGPFQMQIT TLDYSKYLGQ IGIGRIKRGQ VTPGTSVTVV 
DREGNERSGR VQTLLGFLGL ERVEIESADA GNLVAITGID PLDISDTLCD PQQVEALPAL 
TVDEPTVSMG FEVNKSPFAG REGRYVTSRQ IRERLDRELK SNVALRVEAT DDPDRFHVSG 
RGLLHLSVVL ENMRREGYEI AVSRPAVITR TGEDGRTEEP YEHLVADIES DHQGAVIDAL 
NERGGRLQDM QVDSNGRVRL EYTIPARGLI GFQTDFMSLT SGTGILTHVF DHYGPRSDKE 
VGQRREGAMI SGNDGKAVAY ALFNLQERGR LMVSPNDPVY EGMLIGLNSR DADMTVNPLK 
AKELTNVRAA GSDENVILTP PMQLTLEYAL ELINDDELVE ITPQSIRLRK RLLTESERKR 
HKRAS