Gene Hhal_0138 details

Gene Information

• Locus tag: Hhal_0138
• ID: 4710671
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 157319
• End bp: 159250
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639854596
• Product: ABC transporter related
• Protein accession: YP_001001734
• Protein GI: 121996947
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCGCTAC TCGAGCTACG CAACGTTCAA CTCGCCCTGG GGCACCATCC GCCCCTGCTG 
GAAAACCTCA ACCTGACCAT CGACCCCGGG GAACGGGTCT GCCTGGTCGG GCGCAACGGC 
GCCGGGAAGT CCACCCTGAT GCGCATCCTC ACCGGTGCCG TTGAGCCCGA CGACGGCCAG 
GTCCTCTGCG ACCCCGGCGT CCGCGTCGCA CAACTGGCCC AGGAACTGCC CGAAGACACC 
AGCGGCACGG TCTATCAACA TGTCGCCGCC GGCCTGGGCG CACTCGGCGA AACCGTCGAA 
CGCTACCACC GGGTGGCCGA GGCCGTTGCC GCCGGAGATA CCGAACGCCT CGACGAGATG 
CAGGCCTGCC AGGACGCCCT GGACGCCGAG GGCGGGTGGG ACCTAAAGCA GCGCGTGGAG 
GCGGTCATCT CCCGCCTCGA CCTTGACCCC GACGCCCCCA TGGCGCACCT CTCCGGCGGC 
GTGCAGCGGC GGGTACTGCT CGGCCGCGCC CTGGTCACCG ATCCGGACCT GCTCCTGCTC 
GACGAGCCCA CCAACCACTT GGACATCGAG GCCATCACCT GGCTCGAGGG GTTCCTGCGC 
GACTGGCCCG GGGCGCTGCT ATTCATCACC CACGACCGCA CCTTCCTGCA GAGCCTCGCT 
ACCCGCATCG TGGAGATCGA TCGAGGGGCG CTGATCAGTT ACCCCGGCGA TTACCAGAAC 
TATCTGCGCC GGCGCGAGGA ACGCCTGCAC GCCGAGGAGC AACAGCGCGC CGAATTCGAC 
AAGCGCCTGG CCCAGGAGGA GGCGTGGATC CGCCAGGGGA TCAAGGCCCG GCGCACCCGC 
AACCAGGGCC GGGTCCGCGA ACTCCAGCGC ATGCGCGCCG AACGCGCCGA ACGCCGCGAG 
CACCAGGGCA AGGCGCGTTT CAGCGTCCAG GAGGCCGAAC GCTCCGGCAA GATCGTCGCC 
GAGGCCGAGG GGGTCCACTT CGCCTACGGC GACACCACCA TCGTCCGCGA CCTGAACACC 
TCCATCCTGC GCGGCGACAA GGTGGGCATC ATCGGCCCCA ACGGCTGCGG CAAGACCACG 
CTGATCCGCC TGCTCCTCGG GGCGCTGGAA CCCACCCATG GGGTCATCCG GCGCGGCACC 
CGGCTGGAGA TCGCCTATTT CGACCAGCAA CGCGCGGTGC TCGACGAAGA CGCCAGCGTT 
CAGGACAACG TCGGCGGGGG GCGCGAGCAC ATCGACATCA ACGGCCAGTC CCGCCACGTG 
CTCAGTTACC TGCAGGACTT CTTGTTCCCG CCCCAACGGG CCCGTCAGCC GGTTCGCGCC 
CTCTCCGGCG GCGAGCGCAA CCGCCTGCTA CTGGCCCGGC TCTTCAGCCA GCCGGCCAAC 
CTGCTCGTCC TCGACGAACC AACTAACGAC CTCGATGCCG AGACCCTCGA GCTCCTCGAG 
GAGAGACTGC TGGATTTCTC CGGCACCGTA CTGGTAGTCA GCCACGACCG ATCGTTCCTG 
GATGCAGTCG TCACCCAGAG CCTGGCCTAC GAAGGGGATG GGCGCTTCCG CGAATACGCC 
GGGGGCTATA GCGACTGGCA GAGACAGCGC CCCGGCCCAG CACCGCAGCG CCCCTCCGAG 
CGGGGAGGAA AGAACACCAA GGAGCGGGGC CACGCCAGTC CAACCGGAAC GCCGGCGGCG 
AGCACCACCG GCAGCGGTCG GAAACGCCTG ACGCGCAATG AGGAGCAGGA ACTCGCCGCC 
CTGCCGGAAC GCATCGAGGC CCTGGAGCGG GAGCAGGCGC AGCTGCATGA GCAGCTGGCC 
GATCCCGCCC TCTACCAGAG CGACGACGGC CGTCTGTCGG CCTTGCAGGA ACAGCTGGCC 
GAACTGGAGG CGCGCCTGGA GTCGACCTAC GAGCGGTGGC AGGACCTAGA GGCGCGCAGC 
CATGCCGGGT GA 

 

Protein sequence

MPLLELRNVQ LALGHHPPLL ENLNLTIDPG ERVCLVGRNG AGKSTLMRIL TGAVEPDDGQ 
VLCDPGVRVA QLAQELPEDT SGTVYQHVAA GLGALGETVE RYHRVAEAVA AGDTERLDEM 
QACQDALDAE GGWDLKQRVE AVISRLDLDP DAPMAHLSGG VQRRVLLGRA LVTDPDLLLL 
DEPTNHLDIE AITWLEGFLR DWPGALLFIT HDRTFLQSLA TRIVEIDRGA LISYPGDYQN 
YLRRREERLH AEEQQRAEFD KRLAQEEAWI RQGIKARRTR NQGRVRELQR MRAERAERRE 
HQGKARFSVQ EAERSGKIVA EAEGVHFAYG DTTIVRDLNT SILRGDKVGI IGPNGCGKTT 
LIRLLLGALE PTHGVIRRGT RLEIAYFDQQ RAVLDEDASV QDNVGGGREH IDINGQSRHV 
LSYLQDFLFP PQRARQPVRA LSGGERNRLL LARLFSQPAN LLVLDEPTND LDAETLELLE 
ERLLDFSGTV LVVSHDRSFL DAVVTQSLAY EGDGRFREYA GGYSDWQRQR PGPAPQRPSE 
RGGKNTKERG HASPTGTPAA STTGSGRKRL TRNEEQELAA LPERIEALER EQAQLHEQLA 
DPALYQSDDG RLSALQEQLA ELEARLESTY ERWQDLEARS HAG