| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0132 |
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| Symbol | ispG |
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| ID | 4710655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 150784 |
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| End bp | 152025 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639854590 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001001728 |
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| Protein GI | 121996941 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCAG AAACCCGTCC CATTGAAGCC GAGCCGTCGC CCCGGCGCCA CAGCCGAACA
GTCCACATCG GTGGCCTGCG TATGGGCGGC GACGCCCCGA TCGTGGTCCA GTCGATGACC
GACACCGACA CCGCCGACGA GGTGGCCACT GCGGTCCAGG CCGCGGATCT GGCTCGCGCC
GGATCCGAAC TGGTCCGGGT GACCATCAAC AACGAGGAAG CCGCGGCGGC CGTGCCGCGC
ATCCGCGAGC GGCTAGCCCG GATGGGGGTC GAGGTGCCCA TCGTCGGCGA CTTCCACTTC
AACGGCCACA AGCTGCTGCG TCGCCACCCC GAGTGCGCCG AGGCCCTCGC CAAGATGCGC
ATCAACCCGG GCAACGTCGG CAAGGGCAGC CGGCGCGATC CGCAGTTCGC GGAGATGATC
GAGATCGCCT GCACCTACGA CCTTCCGGTA CGCATTGGCG TCAACTGGGG AAGCCTGGAC
GACAGCGTGC TCACCCGGCT GATGGACGCC AACGCCGCAC GCCAGCAGCC GCTGCCGCCG
GAGACCGTCA TGCGCGACGC GGTGGTCACC TCGGCGGTGG AGAGTGCGCA GCGCGCCGAG
GAACTCGGGT TGCCGGGTGA TCGCATCGTG CTCTCCTGCA AGATGAGCGG CGTCCAGGAT
CTGGTGGCGG TCTATCGCGA CCTGGCCCGC CGCTGTGACT ACCCCCTGCA CCTGGGCCTG
ACCGAGGCCG GCATGGGGGT CCCTGGTGTG GTCGCCTCCT CCGCGGCCCT GGCCATCCTG
TTGCAGGAGG GGATCGGCGA CACCATCCGG GTCTCGCTCA CACCGGATCC CGGCGGAGCC
CGCACCCGGG AGGTCGAGGT TGCCCAGCAG GTCCTGCAGA GCATGGGCCT GCGCGATTTC
ACCCCGCGGG TCACCGCCTG CCCGGGCTGC GGGCGCACCT CCAGCGACTT CTTCCAGCAC
CTGGCCGAGC ACATCCGCAA CCATATCGAC AAGCGCATGC CGGAATGGCG CGAGCGCTAC
CCCGGCGTCG AGGGGCTGCG GATCGCCGTC ATGGGGTGCG TAGTCAACGG CCCCGGCGAG
AGCCGCCACG CCGATATCGG CATCAGCCTG CCCGGCGCCG GTGAGCAGCC CTCGGCACCG
GTGTTCATCG ACGGCGAGCG CTCGGTCACC CTCAAGGGCG ATCAGATCGC CGAAGAGTTC
GAGCAGATCG TCGAGTCCTA CGTGCAACGG CGGTTCGGCT AG
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| Protein sequence | MDAETRPIEA EPSPRRHSRT VHIGGLRMGG DAPIVVQSMT DTDTADEVAT AVQAADLARA
GSELVRVTIN NEEAAAAVPR IRERLARMGV EVPIVGDFHF NGHKLLRRHP ECAEALAKMR
INPGNVGKGS RRDPQFAEMI EIACTYDLPV RIGVNWGSLD DSVLTRLMDA NAARQQPLPP
ETVMRDAVVT SAVESAQRAE ELGLPGDRIV LSCKMSGVQD LVAVYRDLAR RCDYPLHLGL
TEAGMGVPGV VASSAALAIL LQEGIGDTIR VSLTPDPGGA RTREVEVAQQ VLQSMGLRDF
TPRVTACPGC GRTSSDFFQH LAEHIRNHID KRMPEWRERY PGVEGLRIAV MGCVVNGPGE
SRHADIGISL PGAGEQPSAP VFIDGERSVT LKGDQIAEEF EQIVESYVQR RFG
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