Gene Hhal_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0094 
Symbol 
ID4710544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp107730 
End bp109406 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content66% 
IMG OID639854552 
Productphosphate ABC transporter, inner membrane subunit PstA 
Protein accessionYP_001001691 
Protein GI121996904 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0581] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGACT GGTTTCGACA AGGCACGCCC TGGATCTGGC TCAACGCCGG CGCCGTGGCC 
GTCTCCCTGG TCATGGTCTT CGGGTTGATC GGCCACATCG CCTACAACGG CCTCCAGCAC
TTCTGGCCGA GCGACGTGAT TGCCTTCGAG TACGACGAGC CCGGCCGCGA ACCGGTGGCC
GTCATGGGCG AGGTGGACGC GGCGGAGACG CTGACCACAG CCGCCGCCCG GGAGCGCGGC
TTCCAGGTCG AGGACGACGA TGCCCTCATT ACGCGCTATC GCATCAAACG CGGCAACCGG
GACGTCGATA GCCGGGATTT CGTCTGGTAC GCCGACGTCA ACATGTCCGA GTGGGCCTAC
CCCGAAGATG CGGTGGTCAT CGAACGCCGC CAGTGGGGCG ACTTCATCGG CTACCTGCGT
GATGTGCGGA TTGACGGGGA GAGGGTCGAG GAGGTCAGCG ACCAAGGGGA TGCGACCTGG
GATCGGTTCC TGGAGCTCTA CCGCGAGAAC CAATCACGGC TGGATGAGAT CCAGCGCATC
GAACGGGTGG AGATCGGTGC GGTCAACGCC GAGATCGAGG AGATCCGGCT TTCGTTGCGC
CAGATTGAGG CGGACCCGAG CCTGAGCGAG GAAGAACGCA CCGAGCAGGT CGAGGCCCTG
GAGGCAGAGC GCGATCGCTG GGAAGCGGAG TACGCGGAGC TGGAGGAGCG CCGCGACGAG
TTGCTGGAGG AGGTCGGGCG CTACGCCGTG GGCATGGAGA CGGCCGCCGG CGAGGAGGTG
GTGATCGCCA TGGGCGACGT GGTCAAGCCC TGGCGCCCCA ACGTCATGAA CGTCTGGGAC
AAGGCCCGCT TCTACGTCGG CGACTTCTGG GACTTCGTGT CGGGCTATCC ACGGGAGGCG
AACACCGAGG GCGGGATCCT GCCCGCGATC TTCGGAACCG TGCTCATGAC CATGGTCATG
GCCGTCTTCG TGACCCCGTT CGGGGTGCTG GCGGCGATCT ATCTGCGCGA GTACGCCCGC
CAGGGGCCTC TGACGCGCAT GATCCGGATC TCCGTGAACA ACCTCGCCGG CGTGCCGTCC
ATCGTCTTCG GCGTCTTCGG GCTGGGTTTC TTCGTCTACT TCGTCGGCGG CGGGGTGGAT
CAGTTCTTCT TCAGTGAACG CCTGCCGGCG CCGACCTTCG GCAAGGGCGG TGTGCTCTGG
GCGTCGCTGA CCCTGGCGCT ACTGACCCTG CCGGTGGTGA TCGTCTCCAC GGAAGAGGGC
CTCTCGCGCA TCCCGGGCTC CATCCGCCAG GGGGCCCTGG CCCTGGGCGC GACCAAGGCC
GAGATGCTCT GGCGGGTGGT GGTGCCGCTG GCCACGCCGG CGATGATCAC CGGTTTGATC
CTCGCGGTGG CCCGGGCGGC CGGCGAGGTG GCGCCGCTGA TGCTCGTCGG GGTGGTCAAG
CTGGCCCCGC AGCTGCCGGT GGACGGCAGC TTCCCCTACG TCCATCTGGA ACGCAGTTTC
ATGCACCTGG GCTTCCACAT CTTCGACGTC GGCTTCCAGA GCCCCAACGT CGAGGCCGGG
CGGCCGCTGG TCTACGCCAC AGCGCTGATC CTGGTGCTGG TCATTATCGT GCTCAACCTG
ACGGCCATGT CCATCCGCAA TCTCCTCAGG GAGAAGTACA AGGCCCAGGG CGACTGA
 
Protein sequence
MRDWFRQGTP WIWLNAGAVA VSLVMVFGLI GHIAYNGLQH FWPSDVIAFE YDEPGREPVA 
VMGEVDAAET LTTAAARERG FQVEDDDALI TRYRIKRGNR DVDSRDFVWY ADVNMSEWAY
PEDAVVIERR QWGDFIGYLR DVRIDGERVE EVSDQGDATW DRFLELYREN QSRLDEIQRI
ERVEIGAVNA EIEEIRLSLR QIEADPSLSE EERTEQVEAL EAERDRWEAE YAELEERRDE
LLEEVGRYAV GMETAAGEEV VIAMGDVVKP WRPNVMNVWD KARFYVGDFW DFVSGYPREA
NTEGGILPAI FGTVLMTMVM AVFVTPFGVL AAIYLREYAR QGPLTRMIRI SVNNLAGVPS
IVFGVFGLGF FVYFVGGGVD QFFFSERLPA PTFGKGGVLW ASLTLALLTL PVVIVSTEEG
LSRIPGSIRQ GALALGATKA EMLWRVVVPL ATPAMITGLI LAVARAAGEV APLMLVGVVK
LAPQLPVDGS FPYVHLERSF MHLGFHIFDV GFQSPNVEAG RPLVYATALI LVLVIIVLNL
TAMSIRNLLR EKYKAQGD