Gene Hhal_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0055 
Symbol 
ID4710504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand+ 
Start bp61435 
End bp62016 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content68% 
IMG OID639854513 
ProductNnrU family protein 
Protein accessionYP_001001652 
Protein GI121996865 
COG category[S] Function unknown 
COG ID[COG4094] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATCC TGCTCCTGGG CCTGATCCTC TTCCTGGGCA CCCACTCGGT CCGCGTCGTC 
GCCGACGACT GGCGTTCCAA CCAGATTGCC GCGTACGGCG AAATCCCCTG GAAGACCGCC 
TACTCGGCGC TGTCGCTTGT GGGCCTGATC ATCGCCATCT ACGGCTACGG GCTGACCCGC 
GTCGATGCCG TCTGGGTGTG GATGCCGCCG AACTGGACGG CCCACCTGAT GGCGCTGGTG 
ATGATCCCGG CGTTCATCCT GCTCTTTTCC GCCTACGGGC CGGCCAATCG CATCCGCAAC 
GCGGTCGGTC ACCCGATGCT CCTGGCCGTG GCCCTCTGGG CGCTGGCCCA CCTGATGGCC 
AACGGGCGGC TGGGCGATCT GGTCTTCTTC GGCGCCTTCC TGGCGTGGGC CTCGGTCACC 
TTCGTCGCGG CACGCGAGCG TGATCGGCGG CAGGCTGCGT CCCCCACCCC GGCTCAGCGC 
TGGGGTAACG CCTGGGCCAT TGGCGGCGGG CTGATCGGCT ACATCGTCTT CGCCCTGTTC 
TTGCACATTC CGATCACCGG GGTCCCGGCC TACGCCTCGT AA
 
Protein sequence
MLILLLGLIL FLGTHSVRVV ADDWRSNQIA AYGEIPWKTA YSALSLVGLI IAIYGYGLTR 
VDAVWVWMPP NWTAHLMALV MIPAFILLFS AYGPANRIRN AVGHPMLLAV ALWALAHLMA 
NGRLGDLVFF GAFLAWASVT FVAARERDRR QAASPTPAQR WGNAWAIGGG LIGYIVFALF 
LHIPITGVPA YAS