Gene Hhal_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0013 
Symbol 
ID4710180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp13400 
End bp14152 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content67% 
IMG OID639854469 
Producthypothetical protein 
Protein accessionYP_001001610 
Protein GI121996823 
COG category[S] Function unknown 
COG ID[COG3228] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGATGGC TGCGTAACTG GCGGCGTCAG CGTATAGCGC AGCGCTACCG GCTTTCGCCC 
GCCGCCTGGA GCCGTGCCGA GGCAGCGCTG CCAGGCTTGC GCCGACTGCC CCCCGGTACA
CGGCAACGGT TGGCTGCTGC GGCGACTGCG CTGATCCACG AAAAGCGCTT CGAGGGCGTG
GCCGGGGTTA CCCTCGATGC CTTGGCGGTC GATACCGTGG CGCTTCAGGC GGCGGTGCCG
GTGCTTGAAT TGGGCGTGGA TTGGTATGCG CCCTGGACGA CCATTCTCCT TTATCCAGCC
GGTTTCGTGG CCACCCACGA GTATGAGGAC GAGGACGGGG TCGTTCACGT CGAGCAGGGC
CCCCTGATTG GCGAGGCGTG GGAGGGCGGG CCGCTGGTAC TCTCCCTGGA AGATGCCCTG
GCACCGGAGC CGGGGAGCAG CGTCGTCATC CATGAGTGCG CCCATAAGCT CGATATGGGG
CAAGGAGCAG TCAACGGTCT GCCCCCCCTG CCACGCGGGA TGACCGTTGA TGACTGGTCG
GCGGCGTTCC TGCCCGCTTT TCACACCATG GAGGCCTACG CGGCCGAGGG AGCGTGCGCC
GTAACTCCGC TCGACCCCTA CGCCGGGCAA GACCCTGGTG AGTTCTTCGC GGTGGCCACG
GAGACGTTCT TCGCCGATCC GCACCGGCTT CGACGGGCCT TTCCGGAGGT CTACCGGCAG
CTAGCGCGGT TCTACGGCTG GTCTCTGGGC TAG
 
Protein sequence
MGWLRNWRRQ RIAQRYRLSP AAWSRAEAAL PGLRRLPPGT RQRLAAAATA LIHEKRFEGV 
AGVTLDALAV DTVALQAAVP VLELGVDWYA PWTTILLYPA GFVATHEYED EDGVVHVEQG
PLIGEAWEGG PLVLSLEDAL APEPGSSVVI HECAHKLDMG QGAVNGLPPL PRGMTVDDWS
AAFLPAFHTM EAYAAEGACA VTPLDPYAGQ DPGEFFAVAT ETFFADPHRL RRAFPEVYRQ
LARFYGWSLG