Gene Hhal_0006 details

Gene Information

• Locus tag: Hhal_0006
• ID: 4710095
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 5672
• End bp: 6319
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 639854462
• Product: dTMP kinase
• Protein accession: YP_001001603
• Protein GI: 121996816
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00242626
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCGAGC GAGGGTGTTT CATCACGGTG GAGGGGCTGG AAGGGGCTGG TAAGACCACC 
TGTCTACAGG CTATCGAGCA GATGCTGCTT GAGGCCGGCA TCGACCGCCC CCTGTTTACC 
CGGGAGCCTG GCGGAACCCC GTTCGGGGAA GCGCTGCGCG GCGCGCTCTT GGATCCGCAG 
TACCGCGGCC TGACGGCAGA GGCCGAGGCG TTGACCGTGT TCGCGGCCCG TGCCGAACAT 
CTGGCGCAAG TCATCCGGCC CACGCTGGAT GCCGGACGCT GGGTGATCAG TGATCGCTTC 
ACGGATGCTA CCTATGCTTA TCAGGGGGGT GGCCGTGGCC TTGGCGATGA ACGGATTGCT 
GTGCTGGAGC GCTGGGTTCA CGGTGGGTTC ACGCCGGACC GCACGCTCCT GCTGGACGTG 
GACCCCACGG TGGGGCGGTC ACGGGTCGCC CACCGAGGCG ACGGAGAAGA CCGCTTTGAG 
CAGGAGCGGG ATCCCTTCTT CCAAGCCGCG CGCGCCGCTT ACGCCCGACG CGCCGCAGCA 
GATCCCGAGC GCTTCCGCTG CATCGACGCC AACCGGCCCG AGGGCGAGGT GGCGGAACAG 
GTACGTGCCG GAGTGGCCGA TCTCTTGCCG GTGGGTGGAC GACCGTGA 

 

Protein sequence

MTERGCFITV EGLEGAGKTT CLQAIEQMLL EAGIDRPLFT REPGGTPFGE ALRGALLDPQ 
YRGLTAEAEA LTVFAARAEH LAQVIRPTLD AGRWVISDRF TDATYAYQGG GRGLGDERIA 
VLERWVHGGF TPDRTLLLDV DPTVGRSRVA HRGDGEDRFE QERDPFFQAA RAAYARRAAA 
DPERFRCIDA NRPEGEVAEQ VRAGVADLLP VGGRP