| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5242 |
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| Symbol | |
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| ID | 5737200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009974 |
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| Strand | - |
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| Start bp | 9353 |
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| End bp | 11116 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641282406 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_001547997 |
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| Protein GI | 159901752 |
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| COG category | [L] Replication, recombination and repair
[V] Defense mechanisms |
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| COG ID | [COG1403] Restriction endonuclease
[COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.461209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACGA CCCCACTTGA TGAGCGCGGA ACCGCGCTCA CCGCTTGGAT CAATCAGACG
CAAGAAGTGT TAGCCCATCG AAGTCTCAAC CAACAACCCT TTCATCGGGT ATTCAATCTC
ATGCGGACAC GGCGACTCGC CACGGTGGCA CTCAATCGGG TGCTTTCCAA CACGGGAGCA
CGCACCGCAG GGATTGACGG AATGACCAAG AAGCATATCG CAACGGATAC AGAACAACAG
GCATTGGTTC AGGAAATCTG GCACGACCTG ACAACCCATC AGTATCGGCC AGCTCCCGTG
CGTCGGGTGT ATATCCCCAA AGCCAATGGA CAGCAACGAC CGCTCGGTAT TCCCACGATC
AAAGATCGGG TGGTGCAAGA GATGGTACGG CTGATCCTCG ACCCGATCTA TGAAAGCACG
TTTTATCGCC ATAGTTATGG ATTTCGCCCC TATCGGGCAA CCCATCACGC GGTGGTACGA
CTCCGCGACC TGATCGGACG ACGAGGCTAC CAGATGGCCC TAGAAGGAGA CATCCGCGCG
TGCTTTGACC GAATTCATCA CACCACCTTA ATCCGGATTC TACGCCGGAC AATCAAGGAT
GAACGCCTGA TAACGGTCAT CCACCAGATG CTCAAGGCCG GAGTGATGGA CGATGGACAG
TGGCGCGTAA CGGAGGACGG AACGCCACAG GGCGGAATTG TCTCGCCACT GCTGGCCAAC
ATCTACCTGA ACGAGCTTGA CCAATGGGTA GCCAACCGAT GGGACACCTA CACCCCACTA
GAGCGCTATT ACCATCGGAA AGCCGGAACG GGGTATCCCT GTCAGATAAC CCGCTACGCG
GATGACTTTG TGGTATTGCT CCACGGCACA CACGCCGAGG CAACCACCTT GAAAACCGCG
CTCGCGACGT TTCTCGCTGA CCACCTCCAC TTGGAATTAT CAGCGGAAAA GACGCTGATA
ACGCCGGTGG AACAGGGCTT TGACTTTCTT GGATTTCACA TCCGGAAATA CCAAGACAGC
ACACGGATAA CCCCATCACG GAAGGCGATT GCGACCTTCA AACGCGAGGC GGCAGACCGC
ATCGGCAAAG GATTTCGGGA CAGTGACGAA GCGGGCATCG TAATGTTGAA CCACTACCTC
ACCGGATGGG GCCACTATTA CCGACGAGTG AGCAGCTCAA CCACGTTTCG CAGTCTCGAC
CACTACATTT GGTGGCGGGT GATGCGAACG ACGTTCCGGC TGCGACGCGG GCGGGGAGTC
CGGCACTTTG GCACACACTG CCGAAGCCAT CGCAAACGAT ACCGTGACGG TCTCAACCGA
AAACACGCAC ATCGACGAGG GGGCCATTAC GGCGTATGGG CAAACACCGC CCAAACGCGA
GCCTACATTG TCACGAGCTT GGCGTTCCTG CCGATTGAAT ATGTCGCCTT ACACCCACAA
CTGCATCCGT ACCGCAAAGC CGACCGGGCA AAACTCGACC AACGCAAACG CTTAGCGCTG
CTGTTGGCGC GAAATAGCCA TCCGGAACGG CCCGCGAACC CTGCCTATGG GAAGGCGTGG
GAACAGATAC GACAAGAGGT ACTCCAGATG AGCAACTACA CCTGCCAACA CTGCGGCACA
CGCGTGCATC GTAGCACGGC AGAAATTGAC CACCGGATAC CGTTGAAACG CTTCACGCGG
CGACAAACCG CGCACAAATT GGAAAATCTC CAATGCCTTT GCCGCGCATG CCATCTTCGG
AAGCATGGCA AAGAACCACG ATGA
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| Protein sequence | MNTTPLDERG TALTAWINQT QEVLAHRSLN QQPFHRVFNL MRTRRLATVA LNRVLSNTGA
RTAGIDGMTK KHIATDTEQQ ALVQEIWHDL TTHQYRPAPV RRVYIPKANG QQRPLGIPTI
KDRVVQEMVR LILDPIYEST FYRHSYGFRP YRATHHAVVR LRDLIGRRGY QMALEGDIRA
CFDRIHHTTL IRILRRTIKD ERLITVIHQM LKAGVMDDGQ WRVTEDGTPQ GGIVSPLLAN
IYLNELDQWV ANRWDTYTPL ERYYHRKAGT GYPCQITRYA DDFVVLLHGT HAEATTLKTA
LATFLADHLH LELSAEKTLI TPVEQGFDFL GFHIRKYQDS TRITPSRKAI ATFKREAADR
IGKGFRDSDE AGIVMLNHYL TGWGHYYRRV SSSTTFRSLD HYIWWRVMRT TFRLRRGRGV
RHFGTHCRSH RKRYRDGLNR KHAHRRGGHY GVWANTAQTR AYIVTSLAFL PIEYVALHPQ
LHPYRKADRA KLDQRKRLAL LLARNSHPER PANPAYGKAW EQIRQEVLQM SNYTCQHCGT
RVHRSTAEID HRIPLKRFTR RQTAHKLENL QCLCRACHLR KHGKEPR
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