| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5240 |
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| Symbol | |
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| ID | 5737198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009974 |
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| Strand | - |
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| Start bp | 6308 |
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| End bp | 8647 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641282404 |
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| Product | Type IV secretory pathway VirB4 protein-like |
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| Protein accession | YP_001547995 |
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| Protein GI | 159901750 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGC AGCCGCTGTG TTTGACGATT GACCCCTTTT CGGTTCGCCA GTACCGTGAG
GAATTGCCCC AGCTGGAGCA GCGCTTTGCC AACTTTTGGG CAGGCATCAC CTACGATGCA
CGGCTGATCT CGTGTACGCG GCGCTTTTCG TTTGCGCCGA TTCGCCAGCG CTTGCGCCAA
CAAACCAGCC CGCTTGACGA CCTGCGCGAT CTCATGCCCA TGCTGGTGTC AGCGCAGGAG
GATGGAAGCC GAAACGCGGC ATTAACCAGC TTGGTCCAGA AGCGGCTCGC AACCTATGAA
CGGGCGACTG CGGCATTACA GGATGCGCCA GCGGTGCATG CTGCTTTCCG CGCGATGGCC
ACGGGTGCGA GCGATGCCAC GACGCTGGCC GTGGTCGCCG ATGGCTGCCG CCGTGCCCTT
TGGCCGTGGC GGTGGCTCAA GAATTATCGG CGGGCGTATG AGGTCATGGA GCGCGAAGGC
AATCCCCTTG GCATTCAGCA TTACTTTGTG GCCTGGCCGT CCGAGTATAC GGATGCCGAG
GCGGTGCGCA GTGTGCTTAA GGGCACGTTC TTATTGCCCG ATGTCCAGAG CGCACCGCTA
CCACCCTTGT TTCATGGGAA ATACCGCGAA ATGGCGACCT ACTTGACCCC GCTCGACGAG
GGTCGTCCCT ACTTAAGGGT GATTCACGCC TTTGATGTGC GGGGTGAGTG GGATTTGGGC
AGTATGCAGG AGCTTTTAGG CGGGGAAGAA GAACTGGCCG TCGCGCTGGA TGTCACCACC
TTGCCCCGCG CCAAGGCCCA ACGCGCGACG ACCGATGCCT TTAATGTGCT TGAGGGTGCG
TTGACGGCGC GGAATGCCGT GAAGGACTCG CGCAGCGAAC GCGCCTACCG CGATGTCAGC
TACGCCATGA ACCAACTCGA TGTCCAGCAG TTGCACGAGG TGGCCTATGC GATCCTGATT
CAAGCACCGA GCGTGCGGGA CTTGAATCGC ATCACCCAAA CCCTGCGTGA CCGCATGGGC
GCACGGCTCA AACTGGATGT GCTGAGCGGA ACCCAAGGCG AATACCTCAA ATTGTTCACG
ACCACGCCGA GCAAGCAGAT TGCCGCGCCG CTCATCCGGC GGAATGCCTT GAGTGAACAC
GTCGCGGCCA AAACGCCCTG GGGGATTCGC AAGAGCGATG CGACCAGCGG GGTGCTGTTT
GGCTACGATC CCCACGACCA ATTGCCGTAC CACTATAACC TCTTTGGCGC GACCGGAACC
GACAACCCGC ACTTGCTGAT GCTCGGCAAA TCGGGCAGCG GCAAAACCGT GAGTTTAGGC
ATGCTAGCGT TGCGCCATGC CGTCGCAGGC CACCAGATCG TGATGTTCGA TCCGGTCGGG
AATTGTGCGC GGCTGTGTGA GGCGGTCGGC GGTGGGGCGG CCTACTATCA CTTGGCCGAG
GACGTGGCGA TTAATGTGCT GGATCCAATG GAAACCAGCT TGCATCGCCA GAAAAGCCAT
GTGGAGCGCA AGTTGTCCAT GGTCTTAGGC CGCGCGATCA CCAGTGGCTC TGGTGTCCAG
TTGCGCCCGC GTGAGTTCAG TAACGCCGAA CGGGGAGCGC TCGATGCCGC CCTCGCATCG
ACGCGGATCT ATGGCCCCGA TGGGGTGTTT TTGGCGCAGA TGGATGACGA CACCGCGCCG
CTCTTGAGCG ATCTGGTGCT GGCCTTGCGC GAAACCAAGC GCCCCGTGGG GCAGGCATTG
GCTGAGGAGA TCACCGATAT TGCCTTGCAA TCGCAAGCCC ACTTGTTTGA TCGCCAAACG
ACCTTGAAGT GGGATTTTGG CAGCGATGTG GTGGCGTACA ACCTCAACAA CGCCGATAAA
GCCTTGCTCC CCTTGTACCT TGATCATGGC ATCGGGGCAC TCAACCACTA CATTCGCAGC
CCTGAACGAC GAGCGCGAGG CCAAAAGCTG GTCTGTGTGG TGGACGAGTT CGGCATTCTT
TCACAAATTG AAAGCCTGAA AAAAGAGGTC GCTAATGCGA CGAAAGAATG GCGGAATTAC
GGTGCAGCGC TTTGGTCGTG TGATCAGAAT TCGGCGACGT ACATGGGTGG TAGCGGCAAT
GCCCAAGACT TCAATAACCT GACGACCAAC AACACCGCCG TGAAGCTGTT TGGGCGGCAA
GAGGGAACCG ACGCGAACCT GCTTGGTGAG GCGTTTCCGG AGTTATCCCC CAGCGATATT
GCAGCCATCA GAACGGCAGG CCCAGGCGAG TTTGTGGGCA TTTTCGGCAC AAACGAAGTC
CACCATCTGC GCATGCAATT GACCGATCAA GAAGTGGCCC ACTTTATTCG GAAGGGTTAA
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| Protein sequence | MNQQPLCLTI DPFSVRQYRE ELPQLEQRFA NFWAGITYDA RLISCTRRFS FAPIRQRLRQ
QTSPLDDLRD LMPMLVSAQE DGSRNAALTS LVQKRLATYE RATAALQDAP AVHAAFRAMA
TGASDATTLA VVADGCRRAL WPWRWLKNYR RAYEVMEREG NPLGIQHYFV AWPSEYTDAE
AVRSVLKGTF LLPDVQSAPL PPLFHGKYRE MATYLTPLDE GRPYLRVIHA FDVRGEWDLG
SMQELLGGEE ELAVALDVTT LPRAKAQRAT TDAFNVLEGA LTARNAVKDS RSERAYRDVS
YAMNQLDVQQ LHEVAYAILI QAPSVRDLNR ITQTLRDRMG ARLKLDVLSG TQGEYLKLFT
TTPSKQIAAP LIRRNALSEH VAAKTPWGIR KSDATSGVLF GYDPHDQLPY HYNLFGATGT
DNPHLLMLGK SGSGKTVSLG MLALRHAVAG HQIVMFDPVG NCARLCEAVG GGAAYYHLAE
DVAINVLDPM ETSLHRQKSH VERKLSMVLG RAITSGSGVQ LRPREFSNAE RGALDAALAS
TRIYGPDGVF LAQMDDDTAP LLSDLVLALR ETKRPVGQAL AEEITDIALQ SQAHLFDRQT
TLKWDFGSDV VAYNLNNADK ALLPLYLDHG IGALNHYIRS PERRARGQKL VCVVDEFGIL
SQIESLKKEV ANATKEWRNY GAALWSCDQN SATYMGGSGN AQDFNNLTTN NTAVKLFGRQ
EGTDANLLGE AFPELSPSDI AAIRTAGPGE FVGIFGTNEV HHLRMQLTDQ EVAHFIRKG
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