| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5125 |
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| Symbol | |
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| ID | 5737083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009973 |
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| Strand | + |
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| Start bp | 171840 |
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| End bp | 173249 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641282290 |
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| Product | peptidase C14 caspase catalytic subunit p20 |
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| Protein accession | YP_001547881 |
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| Protein GI | 159901635 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.499707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACCT TTGACCACGG CTATGCCCTT CTGATCGGCG TTGGAACTCA CCACCATCCC
GCTTACTCGT TACCCGTCAC GGCCAATGAT GCGCACGCGA TCCAACGCAT CCTCAGTGAT
CCTCGCTGGT GTGCCTATCC CACAGCGCAT ATTCGACTCC TGTGCAACGA AGCGGCCACA
ACCGACGCGG TACTCGATGG CTTCGCGTGG CTTACCGCCT GTGCGCAGCG TGATCCGCAG
GCCACGATTG TTGTCTACTA TTCCGGCCAT GGAGGTCGCA ATGAGGAGAC TGATACCTAC
TGTTTGCTGC CCCATGATGC GACCACGGCA ACCAGCCGTC TCTCAACCGC TACCCTGAGC
GCTGCATTGG ATGCGATCCC GGCCAAACGC CTCCTCGTCT TGCTCGATTG TTGTCACGCG
GGAGGCATGA CCAAAGATGG CCCAGACCAG GACAGCCAAT GGACAACCAC GGCTCCCAGC
GCCAGCATGC TCGCCGCATT ACAGCAGGGT GCGGGTCGCG TTGTCCTGTC CTCATCGACG
GGCAAACAAC GGTCGTACAT TCAGCCTGAT GCAAGCCTCA GTCTCTTTAC CACCCATCTC
CTTGCCGCAT TCCAAGGGGC AGGCAATCAA CCAGGGAGTA CCGAGGTGCG CGTGACCCAT
CTGATTCAGT ATGTCAGTCG TCAGGTGCAG CACGCAGCAC AGGCGCTCAA TGCCCGGCAG
ACTCCGTTCT TCCAGGCGGC AAGTGAAGAC TTTGTGGTCT CCTTGATTCG TGGTGGTGCA
GGGCTGGGCA AAGGGGGATG GGAGGCACTC CAGCAGGACG CACACGCCGC AATTGCCGCC
GCATCCCCAC CATCGCCACA TCCGACAATA ACCGATAGCA ATGTGGCCAT TGGCAACGTC
GTCGGAGGCA ACCTCACGCA AACGAAGCAG TCAGGTGGCG TACACGCCGA GGGAGCCACC
ATTGGTCGGA TTGGGACACT GACGGGTGGC GATAGCTATG GCGGGGATCG GATCGAAGGC
TCCAAGACCG TGTATGATGG CCGAGCCACC GTCAACGACA GTACGATCAC AGGAACCGTG
ACCGGACTCA GTACAGGCAC CATCATCCAC GGTGGAAGCG ACAGAGCAGC GCCTGCCCAT
CCCTCGCTCA CCATGGAATG TCCCGAAATG ATGGTTTGTG GTCACGACCA TGCAGTTATC
ATCCATGTTC ATGGGACGAA CCCCACGCTG CGCTATCAGC TTGATCTGCG GGCGACAGGT
ATCCATGAAA CAACCTATTT TATGGGGAGC GAAGTCACGC TGTATGTTAC GCCCTCGATG
CCGGGAGAGC TTCACCTGCG GGCGATCCTG AAGGCGCAGG ACGGAACCCA GATGACCAGC
CAGAGCCAGC GTATCATGGT GCACCGATAG
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| Protein sequence | MATFDHGYAL LIGVGTHHHP AYSLPVTAND AHAIQRILSD PRWCAYPTAH IRLLCNEAAT
TDAVLDGFAW LTACAQRDPQ ATIVVYYSGH GGRNEETDTY CLLPHDATTA TSRLSTATLS
AALDAIPAKR LLVLLDCCHA GGMTKDGPDQ DSQWTTTAPS ASMLAALQQG AGRVVLSSST
GKQRSYIQPD ASLSLFTTHL LAAFQGAGNQ PGSTEVRVTH LIQYVSRQVQ HAAQALNARQ
TPFFQAASED FVVSLIRGGA GLGKGGWEAL QQDAHAAIAA ASPPSPHPTI TDSNVAIGNV
VGGNLTQTKQ SGGVHAEGAT IGRIGTLTGG DSYGGDRIEG SKTVYDGRAT VNDSTITGTV
TGLSTGTIIH GGSDRAAPAH PSLTMECPEM MVCGHDHAVI IHVHGTNPTL RYQLDLRATG
IHETTYFMGS EVTLYVTPSM PGELHLRAIL KAQDGTQMTS QSQRIMVHR
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