Gene Haur_5082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_5082 
Symbol 
ID5737040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009973 
Strand
Start bp100844 
End bp101158 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content46% 
IMG OID641282247 
ProductCRISPR-associated Cas2 family protein 
Protein accessionYP_001547838 
Protein GI159901592 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACAC TCCTGATTTA CGATATTGTG GATGATCGCA TTCGTGGTAA AGTTGCCGAT 
TTATGCCTTG ATTATGCGCT AAAACGGCTT CAATATAGCG CGTTTATCGG CGATATTCCA
CGCACACTGA GCGAAGAATT ATGGCTCAAA ATCAGCAAAT TGGTGCTCAA TCAAGAACAT
TCCATTGAAA TGATTCCGAT TTGTGCCAAA GATTGGGCTG ACCATCGCAG TTCATCAGGC
AAACCCAAAC CGATCCCAAT CGTGGCCGAT GATGACGATG GCTGGGGCGA AAGGAGTGAT
GATGACGACC AATGA
 
Protein sequence
MRTLLIYDIV DDRIRGKVAD LCLDYALKRL QYSAFIGDIP RTLSEELWLK ISKLVLNQEH 
SIEMIPICAK DWADHRSSSG KPKPIPIVAD DDDGWGERSD DDDQ