| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5062 |
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| Symbol | |
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| ID | 5737020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009973 |
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| Strand | - |
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| Start bp | 76504 |
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| End bp | 77229 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641282227 |
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| Product | sortase family protein |
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| Protein accession | YP_001547818 |
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| Protein GI | 159901572 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000275463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACTG ACATGACCCA TCGCCTGATT CACCTCGTCA CCGTGCTGGT GGTGGTGGCC
GGATTGGGCA TGCTGAGCGG CGTGGGTTGG GTCGTGTGGT CGTTTGTATC GACGACGCAG
GCGGTGCAGG CGCGGCAGGC GGCGCTGCCC CCGCTGCCGA GTGTGCAGCC GGTGGTGGCC
ACGCTGGAGC CAACGCAGGT GGTGCTGCCC ACCGCACCCC CGCTGCCGAC GGCGACCGCA
ACAACAATCC CCGTGCCGAC GGCGACCGCC CTGCCGCTGC CGCCACTCGA TGCCCTGCGG
ATTCCGGCGA TTAATCTCGC CCGCCCTGTA TTACCAGCGC CGTTTGTTGA TGGCGCATGG
GCCGTTCCCC AGTATGCGGT TGGTCATCAC GTTGACAGTG GTCAGCCGGG AGACGGAACC
AATATTGTGC TGAATGGCCA TGTGGGCGGC AGTGATCCGG TGTTTGCCGA CGTGGCCTTG
CTCCAGCCGG GCGATGTGCT TTGGCTCTAT CGTGGCACGG CGGCGACCGC CTATGTGGTC
AGTGACACCC TGCGGATTCA GGTGGTCGGG ATTCCGCCGG ACCAGGTGGG AGCCGAGGCG
GAGCGGCTGC TCAGTCCCAC CGATACCGAA TTGGTCACCC TGATCACCTG CTGGCCGCCG
TCGGGGCCGA ACGCCTTTGA CCAACGCCTG ATTGTCCGCG CCGTGCGGCA GGAGGGACAG
CCATGA
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| Protein sequence | MKTDMTHRLI HLVTVLVVVA GLGMLSGVGW VVWSFVSTTQ AVQARQAALP PLPSVQPVVA
TLEPTQVVLP TAPPLPTATA TTIPVPTATA LPLPPLDALR IPAINLARPV LPAPFVDGAW
AVPQYAVGHH VDSGQPGDGT NIVLNGHVGG SDPVFADVAL LQPGDVLWLY RGTAATAYVV
SDTLRIQVVG IPPDQVGAEA ERLLSPTDTE LVTLITCWPP SGPNAFDQRL IVRAVRQEGQ
P
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