| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5042 |
|---|
| Symbol | |
|---|
| ID | 5737001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009973 |
|---|
| Strand | - |
|---|
| Start bp | 56779 |
|---|
| End bp | 57903 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641282209 |
|---|
| Product | putative transposase |
|---|
| Protein accession | YP_001547800 |
|---|
| Protein GI | 159901554 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCACGC TCAACGCCAT CGTCCAACGC TCTGGTGCGG CGTATCGCGC CCAGTGTGGG
ACACGGCTCT CCGATCACCA GCGCCGCGTT ATGCACGCGA TCGAAGCCTG TCGCACTGAG
GCGCTCGGCG GCCAAGTCTT CACGTGTCCT GCCTGTCAGA CCCTCCGCTA TAGCTACCAT
TCGTGCCGCA ATCGCCATTG CCCCACCTGT CAACAGGATG CTGGCGCGGC GTGGCTGACG
GATCAGCAGG CATTATTACT GGCGGTGCCG TATTTCCTTG TCACGTTTAC GATCCCTGCC
GAGCTGCGTC CGGTCGCCCG CGCGAATCAA GCCCAAGTCT ATGCCGCCAT GTTTCGGGCC
TCAGCAGCGG CGCTCCAGCA GGTCGCCGCT GATCCGCGCC ATCTTGGTGG ACAGTTAGGC
ATGCTGGGGG TCTTGCAGAC CTGGACCCGT GATCTCCGCT ACCATCCGCA CATCCACTAT
CTGATTCCTG GAGTTGGTCG CACCGCCACG GGACAACTCG TGTTCCCGCC AGCGGAGAAT
TTCCTCCTGC CGATGCGACC ATTGGCAGTC CTCTTCCGCG CCAAACTGCG GGCTGCTCTG
CGCCAAATAC CCCATGGTAC CGTCATCCCA GCAGCAGTGT GGGAGCACGA CTGGGTGATT
GACTGTCGCC CCGTCGGCAC CGGCGAAACG GCCTTGAAGT ATTTGGCACC GTATATCTTC
CGCGTGGCGC TCAGTAATAA CCGCCTGCTC AGCGCCGATG ATGACCAGGT CACCTTTCGC
TATCGTCACA GCGACAGTGG CGAGAACCGG ACGAGCACGC TCCCGGTGAA CACCTTCCTT
GACCGCTTTA TGGCCCATAT CCTGCCCAAA GGGTTCGTCA AAGTGCGCTA TTACGGGTTT
TTCCGACCAG CGGTGCGTGC CGACCTGCGG CGCATCCAAG CCCAACTGTG GTTACTCCGC
AGACACGGTC AGTTTGACCC AGGCATCCCC CAGCCAGCTG CGCTGGCGCG TGGAGCGCAG
ATCACGCCAT GTCCGGTCTG TGGCATTCAG ATGCAGGGTC GGCATCTCGC GCCCCGCTCG
GCACGTGCGC CACCACAGAG CGTGAACGCT CCTGGCCTAG CGTGA
|
|---|
| Protein sequence | MITLNAIVQR SGAAYRAQCG TRLSDHQRRV MHAIEACRTE ALGGQVFTCP ACQTLRYSYH
SCRNRHCPTC QQDAGAAWLT DQQALLLAVP YFLVTFTIPA ELRPVARANQ AQVYAAMFRA
SAAALQQVAA DPRHLGGQLG MLGVLQTWTR DLRYHPHIHY LIPGVGRTAT GQLVFPPAEN
FLLPMRPLAV LFRAKLRAAL RQIPHGTVIP AAVWEHDWVI DCRPVGTGET ALKYLAPYIF
RVALSNNRLL SADDDQVTFR YRHSDSGENR TSTLPVNTFL DRFMAHILPK GFVKVRYYGF
FRPAVRADLR RIQAQLWLLR RHGQFDPGIP QPAALARGAQ ITPCPVCGIQ MQGRHLAPRS
ARAPPQSVNA PGLA
|
|---|
| |