| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4940 |
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| Symbol | |
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| ID | 5736776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 6268003 |
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| End bp | 6268998 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641282107 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001547698 |
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| Protein GI | 159901451 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.193797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTAGACA TTGCAATGCC CAAACTCGAA TGTGTCGCAG CGGCGGAGAA CTATGGGCGG
TTCAAAATTG AGCCTCTGGA TCCCGGGTAC GGGCACACAT TAGGGAACGC GCTGCGACGG
GTGTTGTTGT CGTCCATCCC TGGGGCAGCG GTCATCAAGA TTAAAATTGA TGGGATTTTC
CACGAGTTTT CGCCAATTCA AGGCGTGCGT GAAGATGCTA CCGAGATTGT GTTAAATGTG
AAAGGCATTC GTTTGCGCTC CTACGCCGAA CGCCCAGTCA AGATGATTTT ATCCAAGACT
GGCCCAGGCG TGGTGCGGGC AAGCGATATT GAATGCCCTT CAAATGTGGA GATCGTTAAC
CCCGATCACT ACATCGCAAC CCTCGATAGC TCCGATGCTC GCTTGGACAT GGAGTTGACC
GTGGAACGTC ACCGCGGCTA TCTGCCAGCT GAAAATCGTG ACCCGGTGCC GATTGGCGAA
ATCCCGGTGG ATGCGATCTT CACGCCGGTG CACAAGGTTA ACTACGTTGT GGAACACACC
CGCATTGGCG GGATGACCGA CTTCGACCGT TTGTTGCTTG AAATTTGGAC TGATGGCACG
GTTAAGCCAG GCGATGCTCT CAGCTACGCC GCGCAAGTGC TGGTTCAATA TTCATCGATC
ATCGCCGATT TCAATCGCTT TGACGATGAA CAAGAGCAAG TTGGCGATGC CAATGGTCTG
GTTATTCCCA GCGAGATCTA CGATATGCCT ATCGAAGATC TTGACCTTTC AACCCGCACC
TACAACTGTC TCAAGCGTGC CGACATCACC AAGGTTGGGC AAGTGCTGGA GATGGACGAG
AAGCAACTGC TGGCTGTGCG GAACTTGGGG CAAAAATCCA TGGACGAAAT TCGCGAGAAA
TTAATCGAGC GCAATTTACT GCCAACCTTG CCTTTCAACT CCGCTATTCT GAACACCAAT
GTCGCTGCCC GTCTGAACGA CGGTAGCGCT GAATAG
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| Protein sequence | MLDIAMPKLE CVAAAENYGR FKIEPLDPGY GHTLGNALRR VLLSSIPGAA VIKIKIDGIF
HEFSPIQGVR EDATEIVLNV KGIRLRSYAE RPVKMILSKT GPGVVRASDI ECPSNVEIVN
PDHYIATLDS SDARLDMELT VERHRGYLPA ENRDPVPIGE IPVDAIFTPV HKVNYVVEHT
RIGGMTDFDR LLLEIWTDGT VKPGDALSYA AQVLVQYSSI IADFNRFDDE QEQVGDANGL
VIPSEIYDMP IEDLDLSTRT YNCLKRADIT KVGQVLEMDE KQLLAVRNLG QKSMDEIREK
LIERNLLPTL PFNSAILNTN VAARLNDGSA E
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