| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4937 |
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| Symbol | rpsM |
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| ID | 5736773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 6266327 |
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| End bp | 6266710 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641282104 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001547695 |
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| Protein GI | 159901448 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000115792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACGTA TTTCAGGGGT TGATATTCCC CGCAACAAAC GGGTGGAAAT TTCCCTTACC
TACATCTACG GGATTGGTCG CACCACCAGC ACTGAAATTC TGGCTCGCAC CAATATCAAT
CCAAATGTTC GGGTCAAAGA TTTGACCGAA GACGAAGTGA TTCGTTTGCG CGAAATCATC
GACCAAGATT ACACCGTTGA AGGCGATTTG CGTCGGGCTG TTCAATTGAA CATCAAGCGT
TTGATGGATA TTGGCTGCTA CCGTGGGATT CGTCACCGCA AAGGCTTGCC ATTGCGCGGT
CAACGCACCA AAACTAACGC CCGTACCCGC CGTGGTAAAA AAGGCGCAGC AATCGGTGGC
AAGAAGAAAG CTACCAAGAA GTAA
|
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| Protein sequence | MARISGVDIP RNKRVEISLT YIYGIGRTTS TEILARTNIN PNVRVKDLTE DEVIRLREII
DQDYTVEGDL RRAVQLNIKR LMDIGCYRGI RHRKGLPLRG QRTKTNARTR RGKKGAAIGG
KKKATKK
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