Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4934 |
Symbol | |
ID | 5736770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 6263638 |
End bp | 6264957 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641282101 |
Product | preprotein translocase, SecY subunit |
Protein accession | YP_001547692 |
Protein GI | 159901445 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000290796 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCAAG CTGTGGTCAA CGCGCTTAAA ATCGCCGAAG TGCGTAAGAA AATTTTGTTC ACCATGATGA TGCTGGTGAT CTTCCGCTTT ATCGCGGCTA TCCCAGTGCC AGGGGTCGAT ACAGCCGAAC TCGATCGGTT GTTTAATGGT CAGTTGCCGT TGAGCGATTT GGCTAACTTC CTCAACTTGC TCTCGGGTGG GGCGTTGCGG CAGTTCTCGG TCGCAGCCAT GGGGGTCTAT CCCTACATCA CGGCTCAAAT TATTATGCAG TTGCTGATTC CGTTGATCCC AGCGCTGGAG CAATTGAGCA AAGAGGGTGA GCAGGGCCGC AATCGTATTC AGCGCTATCA GTATTTCCTC ACCGTGCCAC TGGCCTATCT CCAAGGCTAT GGCCAAATTA AATCCTTGAT CAACAGCGGG ATTAATTTGT TCGGTACGTT GAATTTCAGC ATCACCGAAA ACTTCTTCCA AACCTTCTCG ATCTTGACGA TTATGGTTTC AGGCTCGATG TTCTTGGTTT GGATGGGTGA GTTGATCGAC GAACGCGGGA TTGGTAATGG GCTCTCGATG ATTATCTTCG GCGGGATTGT TACGGCTCTG CCAAGTATGG TTTATCAAGC AATCACCACC TCAAGCTCAG GCAATAACGT CATCGGCGGG ATTTTGCTGC TGATCGTGAC CTTGGCGACC GTGGTGGGGA TTGTGTTGAT CACCGAAGGC CAACGCCGCA TTCCAGTTCA ATATGCCAAG CGCGTGCGCG GCAACAAGGT CTATGGCGGT CAATCAAGCC ACTTGCCATT AAAGGTCAAT ATGGCTGGGA TGATTCCCTT GATCTTCGCC CAAAGCATTT TGATTTTCCC CAGCACCGTT GCTTCCTACT TCTGGAATCC CAACGGTTCG GGCTTCTTCA ATGGCGTTGC CAACTTCTTC GTCAATAGCT TTGGCCCGAA TGGCTTGGCC TTTACCTTGG CGATGTTTGT ATTGGTCTTG CTCTTCACCT ACTTCTATGC CTTGGTGATG TTCAACCAAC AAAATTTGCC TGAAATGTTG CAACGCAACG GCGGCTTTAT TCCAGGCATT CGCCCAGGTC GCAACACCGA AGTCTATTTG ACCAAAGTCT TGAACCGCAT CACCTTGATT GGCGCGGTTG GCTTGGCGGT AGTTGCAGCC TTGCCCTATT TTGTGCAACA AATTACCGGC TTGCAAATTG GCTTTAGCAG CACCGGTTTG TTGATTGTGG TTGGTGTGGC GGTCGATACC ATGCGCCAAC TCGAAGCCCA AATGATGATG CGCAATTACG AAGGCTTCAT CTCGCGCTAA
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Protein sequence | MLQAVVNALK IAEVRKKILF TMMMLVIFRF IAAIPVPGVD TAELDRLFNG QLPLSDLANF LNLLSGGALR QFSVAAMGVY PYITAQIIMQ LLIPLIPALE QLSKEGEQGR NRIQRYQYFL TVPLAYLQGY GQIKSLINSG INLFGTLNFS ITENFFQTFS ILTIMVSGSM FLVWMGELID ERGIGNGLSM IIFGGIVTAL PSMVYQAITT SSSGNNVIGG ILLLIVTLAT VVGIVLITEG QRRIPVQYAK RVRGNKVYGG QSSHLPLKVN MAGMIPLIFA QSILIFPSTV ASYFWNPNGS GFFNGVANFF VNSFGPNGLA FTLAMFVLVL LFTYFYALVM FNQQNLPEML QRNGGFIPGI RPGRNTEVYL TKVLNRITLI GAVGLAVVAA LPYFVQQITG LQIGFSSTGL LIVVGVAVDT MRQLEAQMMM RNYEGFISR
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