Gene Haur_4916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4916 
Symbol 
ID5736752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp6254842 
End bp6255471 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content51% 
IMG OID641282083 
Productribosomal protein L4/L1e 
Protein accessionYP_001547674 
Protein GI159901427 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.1186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCCA AGCTTTATAA CCAAGCCGGT CAAGCTATCG GCACGCTTGA GCTGCAAGAC 
TACATCTTCG GCATCGAGCC TAACATTCCC GTGATGCACC AAGCAGTCAT TCGCCAACTG 
GCTAATGCAC GTTTGGGCAC TCACAGCACC AAGACTCGTG GTGAAGTACG TGGTAGCACG 
CGCAAGTTGT ATCGCCAAAA AGGTACTGGT CGCGCTCGCC AAGGCGCTAT TCGCGCCCCC 
CATCACTCAG GTGGTGGTGT TGTTCACGGG CCAAAGCCCC GCAAGTACAC CAAAGCTATG 
CCCCGCAAAA TGCGCCGCTT AGCTGTACGC TCGGCACTTT CGGCCAAATA CGCTGAAAAC 
CAAATCATTT TCTTAGATGA TTTGAGCTTG AATGCACCAA AAACCAAAGA CTTCCTGGCT 
TTGTTGAAAA ACTTGCCCTT AGTCGGCGAT AAGACGCTGG TGGCATTGGG TGAAAAGAGC 
GATAACATCA CGTTATCAGC CAGCAACCTG CCAAATGTCA AGACCTTGTT GGCAGCCTAC 
CTGAATGTTC GGGATCTGTT GACCTACGAC ACCTTGATTT TGCCCAAGTC GGCACTCAGC 
GTTGTTGAAA CAATTCTGGG CAAAAAGTAG
 
Protein sequence
MEAKLYNQAG QAIGTLELQD YIFGIEPNIP VMHQAVIRQL ANARLGTHST KTRGEVRGST 
RKLYRQKGTG RARQGAIRAP HHSGGGVVHG PKPRKYTKAM PRKMRRLAVR SALSAKYAEN 
QIIFLDDLSL NAPKTKDFLA LLKNLPLVGD KTLVALGEKS DNITLSASNL PNVKTLLAAY 
LNVRDLLTYD TLILPKSALS VVETILGKK