Gene Haur_4884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4884 
Symbol 
ID5736719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp6219615 
End bp6220436 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content54% 
IMG OID641282050 
Producthypothetical protein 
Protein accessionYP_001547642 
Protein GI159901395 
COG category[S] Function unknown 
COG ID[COG1836] Predicted membrane protein 
TIGRFAM ID[TIGR00297] conserved hypothetical protein TIGR00297 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTAC GCTTATTAGC AGGATTTGGC TTGAGTTTGC TGGTTGGTGG GCTGGGCTAC 
TGGCGACGCT CGTTAAGCCT GAGCGGTTGG CTCGGTGCAG TCTTGATCGG CACCTTGACG
GTGGGCTGTG GCAGTTGGGC TTGGGGCTGG CTGATTATTT TGTTCTTCGC TAGCTCAAGT
TTGCTTTCCA AAGTGGGCAA GCGTCGCAAA GCAGCCGTGG CGCTCGATAA ATTCAGCAAA
GATGATCGAC GCGATTTATG GCAGGCCATG GCCAACGGCG GTATTCCCTT AATAACGGCC
TTGGGCTATG CTTGGCAACC ACATTTCGCT TGGTGGGCCT TGGCCCTCGG TGCAACCGCC
ACTGCCACTG CCGATACTTG GGCCACCGAA ATTGGCACCC TGAGCAAAGG TCGCCCATTT
ATGCTCACAA CCTTTAAGCA AGTTGAACGC GGACGCTCAG GAGCGATTTC GGGCTTAGGC
ATGGCCGCTA CCAGCCTTGG AGCCTTGCTG ATTGGCCTAA GTGCTTGGGG TTTGACTAGT
TTAGGGCTTG GTAATGGTCA AGAACCACAG GTGTGGTTTG TGGTTGCCGC AACAATTGGT
GGGATTGCTG GCTCTTTGGC CGATAGCTTG CTCGGCGCGA CGGTGCAGCA AATGCGCTGG
TGCGATCACT GCGCCAGCGA AACCGAGCGG ACAATCCATA AATGTGGCAA CCAAACCCGC
CATTATCGCG GCCTAGCTTG GCTCAACAAC GATTGGGTTA ATTTGATTAG CACTGGAGCG
GGAGCCTTGG TTGCATTATT AATTGCGGTT TTAGCCAATT AA
 
Protein sequence
MLLRLLAGFG LSLLVGGLGY WRRSLSLSGW LGAVLIGTLT VGCGSWAWGW LIILFFASSS 
LLSKVGKRRK AAVALDKFSK DDRRDLWQAM ANGGIPLITA LGYAWQPHFA WWALALGATA
TATADTWATE IGTLSKGRPF MLTTFKQVER GRSGAISGLG MAATSLGALL IGLSAWGLTS
LGLGNGQEPQ VWFVVAATIG GIAGSLADSL LGATVQQMRW CDHCASETER TIHKCGNQTR
HYRGLAWLNN DWVNLISTGA GALVALLIAV LAN