| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4805 |
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| Symbol | |
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| ID | 5736650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 6130186 |
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| End bp | 6132072 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641281971 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001547564 |
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| Protein GI | 159901317 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGCC GACGACGTTA CTGGTGGATA GTGCTGATGT TAGGATTAAT CGCGGGACAA
TTCAGTTGGT GGCAATCGAG CAGCGGTCAA ACTAGCCCGC AAACCTTGCG GGCTGCGGCT
GGCACGTTTT TAATTGGCAG CGCTGCTGAT AGCGATTTTT GGAACTTCAG CGATCGCGCT
CAATATGAGG CAATTTTGGG TGGCCAGTTT AATATTTATA CCCCAGGTAA CCAATTAAAG
TGGGATGCCG TGCATCCTCA ACGTACAACC TACAATTTTG CTCCGGTTGA TCGGCATATT
CAAATTGCCA AAAGCTATGG TCAGCAAATC CACGGCCATA CCTTGCTCTG GCATCAACAA
AACCCCGGTT GGGTCGCCAA CCAACCCTGG ACAGCCAGCG AACTGACCAG CATTTTGTAT
GATCATATTG ATACAGTGGT TGGTCGCTAC AAAAACGATA TTGCAATTTG GGATGTAGCC
AACGAAGTAT TTGATGATAG CGGCGTGTAT CGCCGTTCGT TTTGGTATAA CACCATCGGC
CAAAGCTATG TTGAGTTGGG CTTCAGACGC GCTCGCCAAG CCGATTCGGA TGCGGTGCTG
ATTTACAACG ATTACAATAT CGAAGAAGTT AACGCCAAAT CGAATGCAGT CTATGCCATG
GTCAGCGACT TTTTGGCGCG GGGTGTACCA ATCGATGGGA TTGGCTTTCA AATGCACTTG
CTCGGTTCTG GCATCAATTA CAACAGCTTT GCCCAAAATA TGCAGCGCTT TGCTGATTTG
GGCTTGAAAA TTTATGTAAC TGAAGCCGAT GTACGCTTGC AATTGCCCGC GACCAGCACA
AGTTTGGCTC AACAAGCGAC GGTCTATCAA AATGTGCTTG ATCGCTGTTT GCGCCAGCCA
GCATGTCAAG CTTTTCAATT TTGGGGCTTT ACCGATAAAT ATTCGTGGGT TCCGAATACC
TTCCCAGGTT ATGGCGCGGC CTTGATCTAC GATGAACAAT ACAATCCCAA ACCAGCCTAT
ACCGCCATTT ACAATCGTTT ATTGCAAGGT CGGGGCGGCA CGCCAACTCC AACCAGTGCC
CCAACTGCTA CGCGCACCCC AACCGCCCAA CCAACTGCGA CCAATACGGC GGTTCCAACT
AACACGCCGA CCAGTAGCCC AACACCCACC CAAACAGCGC CCAGACCAGC GCTGATTTTG
AGTGCGCCCA GCCAAGTAAC GTTGGGTCAA GTCTTTACCT TGACGATTCA ATATGTCAAT
ATTGGCTTGC AATACACCAC CGTAACTAGC AGCCCAGCTG GCTTGGTGCA GCTTGATCCA
CCGTTGAGTA TGCCCTGTAA ATATAACCAA CACCCAACGC AATGCAAAAA TATCACCTTT
AAAGCAACCG CTTTGGGTAC GGTACAATTG AATGCCAGCG CAACTGGCGA AGTGCCAATT
GCTGGTGGTG GTTGGGCTTG GGGTTCAGCG TTTGCCCAAA ATCCAGTCAG CGTCACCATT
GTCGATAGTG TTCCAACCAA CACCCCAACT CCAACGCTCA CGCCAAGCCC AACCCCAATT
AGTGGTGGTT GCCGCGTCAA CTATGCGATC AACAGTCAAT GGGGCAATGG ATTTGTGGCA
AACGTGACGG TGACCAACGC CAGCAACACG CCGATCAATG GCTGGGCGCT GAATTGGAGT
TTTGCTGGCA ACCAGCAAAT TAGCAATGCT TGGAATACCA GCCTAACCCA AACTGGCAAT
GCTGTAGTGG CTCGTAACGC TGGCTGGAAC AACCTTATTG CTGCGCAAGG CTCGGCCTCG
TTTGGCTTCC AAGCCAGTTA CAGCGGCTCA AATGCGATTC CCAGCAGCTT TAGTTTGAAT
GGTGTGGCTT GTAGCATCGT GCCATAA
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| Protein sequence | MNSRRRYWWI VLMLGLIAGQ FSWWQSSSGQ TSPQTLRAAA GTFLIGSAAD SDFWNFSDRA
QYEAILGGQF NIYTPGNQLK WDAVHPQRTT YNFAPVDRHI QIAKSYGQQI HGHTLLWHQQ
NPGWVANQPW TASELTSILY DHIDTVVGRY KNDIAIWDVA NEVFDDSGVY RRSFWYNTIG
QSYVELGFRR ARQADSDAVL IYNDYNIEEV NAKSNAVYAM VSDFLARGVP IDGIGFQMHL
LGSGINYNSF AQNMQRFADL GLKIYVTEAD VRLQLPATST SLAQQATVYQ NVLDRCLRQP
ACQAFQFWGF TDKYSWVPNT FPGYGAALIY DEQYNPKPAY TAIYNRLLQG RGGTPTPTSA
PTATRTPTAQ PTATNTAVPT NTPTSSPTPT QTAPRPALIL SAPSQVTLGQ VFTLTIQYVN
IGLQYTTVTS SPAGLVQLDP PLSMPCKYNQ HPTQCKNITF KATALGTVQL NASATGEVPI
AGGGWAWGSA FAQNPVSVTI VDSVPTNTPT PTLTPSPTPI SGGCRVNYAI NSQWGNGFVA
NVTVTNASNT PINGWALNWS FAGNQQISNA WNTSLTQTGN AVVARNAGWN NLIAAQGSAS
FGFQASYSGS NAIPSSFSLN GVACSIVP
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