Gene Haur_4639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4639 
Symbol 
ID5736486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5927698 
End bp5928357 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content51% 
IMG OID641281803 
Producttranslation initiation factor IF-3 
Protein accessionYP_001547398 
Protein GI159901151 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000486529 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGTTTTG ATGTCCTTTT TTGGAAGGAG CCTCCTATCA GAGACAAGCT ACGAATCAAT 
AATCGGATTC GCGTGCGTGA AGTGCGTCTG ATCGACGAAA ACGGGAACCA AGTTGGGATC
ATCACGACCC GTGATGCACT CGACATGGCA CATGACCGCG ATCTCGACTT AGTTGAGGTT
GCCCCGAATG CTAGCCCGCC GGTTTGCCGC CTTATGGATT ACGGCAAGTA CCGCTACGAG
CAAACCAAGA AAGAACGCGA AGCCCGCAAG AATCAAAAAC AGGTCGAACT GAAAGAGATT
CGCATGCAGC CGCGCACCGA CACCCATGAC TTGCAGGTAA AGGTGAACAA TGCTCGCCGT
TTCCTCGAAG AAGGGCATAA AGTGAAGTTC TCGGTACGTT TCCGTGGGCG TGAAATCACT
CACCCTGAAA TTGGCCGCGA AATGCTCGAG CAAATTGCCG AGGATTTACG CGATCATGGG
GTGCTTGAGC AAAAACCCAC GCTCGAAGGT CGGGCCTATT CGTTGATCAT GGCCCCATCA
CCAAGCAAAA CGCAGCCTGC GAAACGTAGC GATAAACCGG CTCCACCATT ATCATCATTA
GGAGATATTG ATTTCGATGC CGAAGATGAA GACCAACAAG CAGGCCAAGC GCCGCTTTAA
 
Protein sequence
MCFDVLFWKE PPIRDKLRIN NRIRVREVRL IDENGNQVGI ITTRDALDMA HDRDLDLVEV 
APNASPPVCR LMDYGKYRYE QTKKEREARK NQKQVELKEI RMQPRTDTHD LQVKVNNARR
FLEEGHKVKF SVRFRGREIT HPEIGREMLE QIAEDLRDHG VLEQKPTLEG RAYSLIMAPS
PSKTQPAKRS DKPAPPLSSL GDIDFDAEDE DQQAGQAPL