| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4637 |
|---|
| Symbol | |
|---|
| ID | 5736484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 5926262 |
|---|
| End bp | 5927050 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641281801 |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_001547396 |
|---|
| Protein GI | 159901149 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0580801 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTGATCG ACCTCATTAC CAGCACTGCT AATCATCACG TTAAATACCT GCGTTCGTTG
TTGCGTTCCC GTAAGGATCG TCATAGCGAA CGCAGGTTTG TTGTTGAAGG GGTGCGCTTG
GTTGGCGAAG CGCTCAATTT TGCCACACCA AGTTTGTTGC TCTATGTGCC TGAGCAGTTG
GCAAGCACCG AACGCGGCCA GCAGTTGCTC GATCTCATTG CTCAATTGCC CAATGCTTTT
GCAACAACCC CAGCAATCTT GGCTGGACTC AGCGATGTTG AGACCCCTCA AGGCATCATC
GCGGTTATCC CAATGCCTCA ATTCACCAGC CAATCAGCCT CATTAATCTT GATGCTCGAT
GGCGTGCAAG ATCCTGGCAA TGTTGGCACG CTGTTGCGCT CAGCCGAAGC CGCTGGCGTT
GGCCAAGTGT TGTGTTTACC AGGCACTGCC GATGTGTGGA GTCCCAAAGT TGTGCGCTCA
GGTATGGGCG TGCATTTTCG GCTACCCATC GTCGATGGCT TAAATTGGGA AACTGCCTTG
CCGCTGATTG AGCATTGCCA ACAACGCTTC GCGGCGGTGC AAGATTCACC CTTATCCTAT
GATCAGGCTG ATTTGACCCA ACCAACTGTG TTGATTATCG GCAATGAAGC TAACGGCGTT
TCGGCCACCA CCCTCAGCTA TTCCAGCACC ATCACCATCC CCATGCTTGG CTCGCTCGAA
TCGTTGAATG CTGCGGTTGC CGGCAGTGTG TTATTATTCG AGGCCGCCCG CCAACGCCGA
GTAAAGTAA
|
|---|
| Protein sequence | MLIDLITSTA NHHVKYLRSL LRSRKDRHSE RRFVVEGVRL VGEALNFATP SLLLYVPEQL
ASTERGQQLL DLIAQLPNAF ATTPAILAGL SDVETPQGII AVIPMPQFTS QSASLILMLD
GVQDPGNVGT LLRSAEAAGV GQVLCLPGTA DVWSPKVVRS GMGVHFRLPI VDGLNWETAL
PLIEHCQQRF AAVQDSPLSY DQADLTQPTV LIIGNEANGV SATTLSYSST ITIPMLGSLE
SLNAAVAGSV LLFEAARQRR VK
|
|---|
| |