Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4562 |
Symbol | |
ID | 5736407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 5838866 |
End bp | 5840110 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641281724 |
Product | ROK family protein |
Protein accession | YP_001547321 |
Protein GI | 159901074 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGTC CTTCGGCATT GACAGCTGAT CTGAGTTTGA TGCGAGAACT CAACCGCGCC CTGGTACTCC AGTTAATTCG GCGTGAAGGA CGGATTTCGC GGGCAGATAT CGCCAAGCAC ACCAAGTTAA GTCGTTCGAC CGTTTCAAGC ATCATTAACG ATCTGATTGA CGCAAGCCTT GTTACGGAAA CGGGTATTGG TACCTCAAAA GGTGGCCGAC GGCCAATTAT CCTCGAATTC AATTATCAAG CCAATTATAT TATTGGGCTT GATGTTTCGC GCAACGCCGT TAGCGCCGTT ATTACCGATT TGAACGCCCG AATCTGTTCA CGCCGTCAAA TTTCCTTCAA TGTTAACGAC GGCCCCACCG TTGGCATGCC GCTGATCAAA CAATTGATTA GCACGATGCT GACCGAATCG CCGGTTGGTC GTGGCCGCAT TAGTGCAATT GGAGTTGGCG TGCCTGGCCC ATTGGATTTT CGCAATGGCC GCACAATTGC CCCGCCAGTT ATGCCTGGTT GGGATAACGT GCCAATTCGC GAAGAGTTAA GCCAAACCTT CCGTTTGCCC GTATCAATTG ATAACGATGC CAACTTGGCC GCGATGGCCG AGTATCGTTG GGGCGCAGGC CAAGGCGCTC AAAACATGGT CTACTTATAT ATGAGTAGCG CCGGGATTGG TGCTGGCTTG ATTATTGATA GTCATTTATT CCGTGGCTCG ATCGGCAGCG CTGGCGAGGT TGGCCATACC ACTCTCAGCG TCGAAAACGA TGAATCATTT GGGCCAATCA ACGCTGGCTC GCTCGAAGCC TTGGCTTCAC AAATCACGGT TTTACGGCTG GCCCGCGAGC AAAAGCTGAT TAGTGCCGAT GATGATGTGC ATACCTTGGT GCGTAAAGCC GAGAGCAGCC CTGAAATTCA AGCTATTTTG CGGCGAACTG CCCACTATCT TGGTGTGGCA ATTGCCAGTA TCATTAATAT ATTCAATCCT GATCGGGTTG TGATTGGCGG GGTTATTCCG GAAACCTCAC CATTATTAAT CGAGACGATT CGAGCAACGG TGGCGCGACG CGCTTTATCG ATTGCAGTGA ATAATACCTC GATTGTACCA GGCGCACTAG GCCGCAATGT CGCAGCTTTA GGAGCCGCAG CCCTTGCTAC CGAGCGCTTA TTTGCGCCGC CAGCCCTGGA ACGCCCCGCA ACTTTAGGGG TGCATTCCAA CGAGGTTGGT TCGTTGGCAA GCTAA
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Protein sequence | MNRPSALTAD LSLMRELNRA LVLQLIRREG RISRADIAKH TKLSRSTVSS IINDLIDASL VTETGIGTSK GGRRPIILEF NYQANYIIGL DVSRNAVSAV ITDLNARICS RRQISFNVND GPTVGMPLIK QLISTMLTES PVGRGRISAI GVGVPGPLDF RNGRTIAPPV MPGWDNVPIR EELSQTFRLP VSIDNDANLA AMAEYRWGAG QGAQNMVYLY MSSAGIGAGL IIDSHLFRGS IGSAGEVGHT TLSVENDESF GPINAGSLEA LASQITVLRL AREQKLISAD DDVHTLVRKA ESSPEIQAIL RRTAHYLGVA IASIINIFNP DRVVIGGVIP ETSPLLIETI RATVARRALS IAVNNTSIVP GALGRNVAAL GAAALATERL FAPPALERPA TLGVHSNEVG SLAS
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