Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4476 |
Symbol | |
ID | 5736327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 5724125 |
End bp | 5728582 |
Gene Length | 4458 bp |
Protein Length | 1485 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641281639 |
Product | glutamate synthase (ferredoxin) |
Protein accession | YP_001547236 |
Protein GI | 159900989 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.4617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCGCC TGTTGTATGA CCCACGCTTT GAACACGATG CATGTGGCAT TGGCTTTGTC GCTCGAATTG ATGGAAAACC AACCCATGCA ACAGTGAGCT TAGCCCTCGC GGCGCTTGGT AGTCTGACCC ATCGCGGTGG GATTGCCGCC GACGGTCTGA CAGGTGATGG CGCTGGCCTC TTAACCACCA TTCCACGGGC ATTTATGGCT CGTGAATTAG CTGCTCGCCG CATTTTGGCT AACCCGCAAC GCATTGCCGT TGGCATGATC TTTTTGCCAA CCAGTAACAC CGAACGTGCC CGCGAATTGA TCGACGATGC ACTCGTCTGG CGAGGCTTAC GACCGCTTGG TTGGCGTGAA GTACCGCTTG ATCGTGAGCA ACTTGGCCCG ATTGCCCGTG ATATTTGTCC ACAGATTGAG CAAGTTTGGG TTGATCGCCC CGCCACGATG GACGACGATA GCTTTGAACG TGAACTCTAC CGCGCCCGCC GCCGCGCCGA ACGTACCGCC CTCGCCGAGA ACATCGACCT CTACATTCCT TCACTCTCTT GTCGCACGAT TGTTTATAAA GGCTTGATGC TGCCAAGTCG GCTCTCACTG TTCTACCCCG ATTTGGCCGA TAGCGATTAT ATTGCCAGCG CTGCGGTTTA CCACCAACGT TATTCCACCA ACACGATGCC AACCTGGAGC CGCGCTCAAC CCTTCCGCGT TGTCAGCCAT AACGGCGAAA TCAACACCTT GGCTGGCAAT GTGAATTGGA TGCGAGCACG CGAAGCTCAT CTCTCTAGCC CGCTGTTGGG TAATGTGCGC GAACTTGCGC CAATCGTTGA CGAACGCGGC AGCGATTCAG CCCAATTTGA TAATGTGCTG GAATTGTTGG TCCGCGCTGG CCGCGATGTG CGTCATTCCT TATTAATGAT GATGCCCGAA GCTTGGGAAC ATATCGCTGA TTTGCCCCAA GATGTGCGCG ATTTCTACCA GTGGCACGCC AATTTGATGG AAGCTTGGGA CGGCCCCGCC GCCATGACCT TCTGCGATGG CAAAATCGTT GGCTCAGCCT TGGATCGCAA CGGCTTGCGC CCGGCCCGCT ATATCGTCAC CGATGATGGT TTAGTGGTTG TGGGCAGCGA AGTCGGCGCA ACCCCAGTCG ATGAAGATCG CATTATTCGC AAGGGTCGGC TTGGCCCAGG CCAGATGATC GCTGTTGATC TCATCAAAGG CCAATTGTTG GATAATACTG CGGTCAAAGC CATGTTTGCT GCCCGCCAAC CTTATGGCCA ATGGCTGCAA AACAAGAGTG TCGATTTGGC CGAGTTGGTC GAGGCCTACA CCGAAGCTGC GGTCGAACTC AATCCTGACG ATTTATTGCG CTTGCAAGCA GCGTTTGGCT ATACCGACGA AAACTTGGCG ATGGTGCTCA AGCCAATGGG TCGCGAAGGA GCCGAACCAA TTGGCTCGAT GGGCGACGAT ACCCCAATGG CGGTATTTTC GAACTTGGCT CGCCCAGTGT ATGGCTACCT CAAACAACGC TTTGCTGAAG TAACCAACCC ACCAATCGAT CCCTTGCGCG AACAATTGGT GATGTCGTTG TCGATTCGCT TAGGGCCACG CCACAACATT TTGCTCGAAC GCCCTGATCA AGCCCACCAA ATTGCCTTGG CCAGCCCGAT TTTGCGCAAT ATCGAGCTAG CAGCGTTGCG AGCTTGTACT GATCGTAGTT TTGGTACCGC CACCTTGGAT ACCACCTTCC CCGTCACCGA CGATGTTCAA TGGATCGAAC ATGCGCTTGA TGACTTGTGT AGCAGCGCCG ATCGCGCCTT GGATACTGGG GCAACCATTC TTGTGTTGAG TGATCGCGAA GTTGCGCCGC AACGAATTGC CATCCCAACT GTCTTGGCGC TCGGCGCAGT TCACCATCAT CTAATTCGCA CTGGTCGCCG TTCAACCTGC TCGTTGATTG TCGAAACTGG CGAAGCTCAC GAAGTTCATC ATGTGGCGGT TTTGGTTGGC TACGGCGCTG AAGCCGTCAA CCCCTACGTC GCCATCGCCA CGATTCGTGA AATTGCCAAA GAACGCTCAC GCACCCCAAT CACTGCCGAT CAAGCCGAAG ATAACTATGT GCATTCTTTG GAAAAAGGCT TGCTCAAAGT GATGTCGAAG ATGGGCATTT CAACCGTCGA TAGCTACTGT GGAGCGCAAA TCTTCGAAGC GATTGGCTTG AGCGATGCCG TGATTGCCCG TTGTCTGACT GGCACGCCCT CACGCTTTGG CGGAGCCGAT TGGCAACGTT TGGGCCGCGA AAGCTACCAA CGCCATGCCC AAGCGTTTGG TTTAGAAAAA CCAGCCCTCA GCCACCCAGG TTTGTACAAA TTCCGCAAAG ATGGCGAATA TCATGCCTTC CAACCAGCGG TGGTGCACGC TTTGCAAAAA GCGGTGCGAG CAGCAGTCGA TAATGGCGCA GATTTCGAAG CGGGCTATGC AACCTATCGC GAATACAGCG ACTTGCTGAA CCAACGCCAA CCATCTGACC CACGCGATTT GCTAGATTTT GTCGCAACTG AGCCAATTTC AATCGATGAG GTTGAGTCAA TCGAAACGAT TGTCAAACGC TTCTCGACAG CGGCAATTTC CTATGGCTCG TTGAGCGCCG AAGCTCACGA AACCTTGGCA ATCGCCATGA ATCGGCTTGG CGGCATGAGC AATAGCGGCG AAGGCGGCGA AGACCCAGAG CGCTTTGGCA CCGAAAAAGT CAGTGCAATC AAGCAAATTG CCTCAGGCCG CTTCGGAGTT ACACCCAGCT ACCTGATGAA CGCCCGCGAG TTGCAAATTA AAATGGCGCA AGGCTCCAAG CCAGGTGAAG GCGGCCAAAT TCCAGGCAAT AAAGTTACTG AAGACATTGC CCGCACCCGC CATACCACGC CAGGCGTAAC CTTGATTTCG CCACCACCCC ACCACGATAT TTATTCAATT GAGGATTTAG CTCAGTTGAT TTACGACATG CGCACGATCA ACCCCACCGC TGCGGTTTCA GTCAAGCTCG TCTCGGAAAT GGGGGTTGGC ACGATTGCCG CAGGTGTGGT CAAAGGTGGC GCTGATGTGG TGTTGATTAG TGGCAATTCG GGCGGCACTG GCGCTTCACC ATTGTCATCG ATCAAAAACG TCGGCATTCC ATGGGAAATT GGCTTGGCTG AAACTCAACA AACTCTGATG ATCAACCAAC TACGCGATCG AGTGCGGGTG CGGGCCGATG GTGGCTTGCG CACTGGCCGC GACGTAGTAA TGGCCGCCTT GCTTGGCGCA GATGAATATT CCTTTGGCAC CTCAGCGCTG ATTGCCGAAG GCTGTGTGAT GGCTCGCGCC TGCCACAACA ACACCTGCCC AGTTGGGATT GCCACTCAAC GCGCCGATTT ACGCGCCAAA TTCCCCGGCA AACCTGAGCA TGTGATGGCC TTTATGCAAT TTATCGCCCA AGAAGTGCGT GAATTGCTGG CCCAACTTGG TGCTCGTAGC TTGAACGAAA TTATTGGCCG CGTCGAATTA TTGCGCCAAC GCCAAACCAA CAATCCCGAC CACGATGCGC TTGATCTTAG CCCATTGTTG GGCTTGGCCA ACGCTGGCCC ACGGCGCTTC AACGGCATGC CGCAGTTGGT TGGTATCGAT CGGCTCAATC AATTTTTGGT CGATAGTGCC TTTCCAAGTG CCAAAGCTGG TCAAGAAGTG ATTATCAACG CCGAAATCAC CAACGAAGAT CGCTCAACCG GCATCACCTT GGCAGGCGAA TTGGCGCTGC TCAAAAATAC TGGTCACGTC AGCATGAATT TTGCTGGCAG TGCTGGCCAA AGCTTTGCTG CCTTCGCGAC GCGCGGCATG CAACTCAACT TGGTTGGCGA TGCTAACGAT TATGTTGGCA AAGGCTTGGC TGGTGGCGAA ATTGTCGTCA GACCACGGCC AACCGCCCAG TTCCTTGCCC ACGAAGCCAC AATTATCGGC AACACCGCCT TGTATGGCGC AACCAGTGGT AGCTTGTATG CTGCTGGCCG CGCTGGCGAA CGCTTTGCTG TGCGCAATAG CGGCGCGGTT GCCGTAATTG AAGGCATCGG CGAGCATGGT TGCGAATATA TGACAGGCGG CACGGTTGTG GTGCTTGGCA GCACTGGCAA CAACTTTGGC GCAGGCATGA GTGGTGGTCA GGCCTTTGTC TACGACCCCA ACGAACGCTT CCTTGGCCGC CTCAACGACG ATATGGTGAT CGCCGAACGG GTTGAATCAC CACTGGTTGC CGACCACTTG CGCGAACTAA TCGAGCGCCA CGCGGCACTA ACGGGAAGTG TCCAGGCCAA CGATATTCTC GCCAACTGGG AAGATCAACA AGGAGCCTTC TGGCACATTA TGTCCAAGGC GGCCCATGCT GCGGCTGCCC AAAATAACCA GCCAGAACTG GCTAAAGTCG CCGCTTAA
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Protein sequence | MNRLLYDPRF EHDACGIGFV ARIDGKPTHA TVSLALAALG SLTHRGGIAA DGLTGDGAGL LTTIPRAFMA RELAARRILA NPQRIAVGMI FLPTSNTERA RELIDDALVW RGLRPLGWRE VPLDREQLGP IARDICPQIE QVWVDRPATM DDDSFERELY RARRRAERTA LAENIDLYIP SLSCRTIVYK GLMLPSRLSL FYPDLADSDY IASAAVYHQR YSTNTMPTWS RAQPFRVVSH NGEINTLAGN VNWMRAREAH LSSPLLGNVR ELAPIVDERG SDSAQFDNVL ELLVRAGRDV RHSLLMMMPE AWEHIADLPQ DVRDFYQWHA NLMEAWDGPA AMTFCDGKIV GSALDRNGLR PARYIVTDDG LVVVGSEVGA TPVDEDRIIR KGRLGPGQMI AVDLIKGQLL DNTAVKAMFA ARQPYGQWLQ NKSVDLAELV EAYTEAAVEL NPDDLLRLQA AFGYTDENLA MVLKPMGREG AEPIGSMGDD TPMAVFSNLA RPVYGYLKQR FAEVTNPPID PLREQLVMSL SIRLGPRHNI LLERPDQAHQ IALASPILRN IELAALRACT DRSFGTATLD TTFPVTDDVQ WIEHALDDLC SSADRALDTG ATILVLSDRE VAPQRIAIPT VLALGAVHHH LIRTGRRSTC SLIVETGEAH EVHHVAVLVG YGAEAVNPYV AIATIREIAK ERSRTPITAD QAEDNYVHSL EKGLLKVMSK MGISTVDSYC GAQIFEAIGL SDAVIARCLT GTPSRFGGAD WQRLGRESYQ RHAQAFGLEK PALSHPGLYK FRKDGEYHAF QPAVVHALQK AVRAAVDNGA DFEAGYATYR EYSDLLNQRQ PSDPRDLLDF VATEPISIDE VESIETIVKR FSTAAISYGS LSAEAHETLA IAMNRLGGMS NSGEGGEDPE RFGTEKVSAI KQIASGRFGV TPSYLMNARE LQIKMAQGSK PGEGGQIPGN KVTEDIARTR HTTPGVTLIS PPPHHDIYSI EDLAQLIYDM RTINPTAAVS VKLVSEMGVG TIAAGVVKGG ADVVLISGNS GGTGASPLSS IKNVGIPWEI GLAETQQTLM INQLRDRVRV RADGGLRTGR DVVMAALLGA DEYSFGTSAL IAEGCVMARA CHNNTCPVGI ATQRADLRAK FPGKPEHVMA FMQFIAQEVR ELLAQLGARS LNEIIGRVEL LRQRQTNNPD HDALDLSPLL GLANAGPRRF NGMPQLVGID RLNQFLVDSA FPSAKAGQEV IINAEITNED RSTGITLAGE LALLKNTGHV SMNFAGSAGQ SFAAFATRGM QLNLVGDAND YVGKGLAGGE IVVRPRPTAQ FLAHEATIIG NTALYGATSG SLYAAGRAGE RFAVRNSGAV AVIEGIGEHG CEYMTGGTVV VLGSTGNNFG AGMSGGQAFV YDPNERFLGR LNDDMVIAER VESPLVADHL RELIERHAAL TGSVQANDIL ANWEDQQGAF WHIMSKAAHA AAAQNNQPEL AKVAA
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