| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4312 |
|---|
| Symbol | |
|---|
| ID | 5736171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 5505119 |
|---|
| End bp | 5506783 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641281472 |
|---|
| Product | TPR repeat-containing serine/threonin protein kinase |
|---|
| Protein accession | YP_001547072 |
|---|
| Protein GI | 159900825 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase
[COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCATTC TCGATAAGCT CCTCTCGCGC TCTGATGATG CCGATAATTT AAAGGGCGTT
GAGTTTAAAG TTGGCGATAT TATCGACCAA CGCTATTTGG TGCGCAATGT GCGCAAAGGA
TTTATGGGCT TAGTCTACAT CGCCCGCGAT TTGCGCTCGG AGCAAACCGT GGCGATGAAA
ACGTTTCAAG CCAAATTTAC ATGGGTCGAT AGCGCAATTG CTAATTTTAC CCGTGAGGCC
GAAGTTTGGA TGCGGCTTGG TTCGCACCCA AATATTGTCG AAGCAACCAG AATTGTGACC
ATCGCTGGCC GTCCGCATAT CGTCATGGAG TTTGTGCCAG GGGTTTCGCT GCGCGAGATG
ATGCGCCGTG GTCGCTTGCG TTTCAAGCAC ATTGTCGATT TTGCCATCCA AATTTGTTGG
GGCATGCAAT ATGCCTACGA TCGCTGTAAT TTGATTCACC GCGATCTCAA GCCCGATAAT
GTGATGGTTA CACCCGAAGG CATCGCCAAA GTCACCGATT TTGGCTTGGC GCAAGGTGCA
AGTGTTTCAA CCAAAGTTCG TTGGGGCCAC GATTCGCAGC ACAACGAATC GAAAATTGTG
ACCCACGCCA GCGATTTGTT TGGCGGTTCG CAGCCCTACA TGTCGCCAGA ACAACGGGCA
CCAGGCACGC CGTTGGGCAC AACTAGCGAT ATTTATGCCA TGGGCGTGAT GCTGTATGAG
ATGATGATCG GCGATTTGCC GTTCAAAGCC CCAACCGTTG CTGAATTAAC GCATCTGCAT
TGTAACGTAC CGCCGCCAAC GCCCTCAGAA GTACGGCCTG ATTTGCGGCG CGGCTGTGAT
CATGTGATTT TGCGCTGTTT GGCCAAAAAA GCCAATGATC GCTATCAATC GTTCGATGAG
CTAGAACACG ATTTGCAATG GCTGCGCAAA TATCACCTTG GCGAAGAATT GGCGCGGCCA
ACCGTGACGA TTAGCCTTGA AACCCAAGCC GCCGATTTGA ATGCCAAGGG GATTGTGCAT
ATGTCGCTGC ACGAATACAG TGCGGCGGTT AAATGTTTTC GCCAAGCCAC CGAGCTTGAA
AGCAGCCGCG CAACCTATTG GCTCAATTTG GGTATGAGCC AAGTGGCCTT GTTGGCCTAC
AACGATGCGC TCAAAAGCTA TGAACATGCC TTGACTTTAA ATCCAAGCCG CGATGAAGAA
GTTCGTTTGC ACTGGCTTGC TGGTGAATCG CACGAATATC TGTATCAATT GCGCGAAGCC
TTGGAAGATT ATGATGCAGC CTTAAACTTG GACAAAAAAG AGCGGCGGGC TTGGCTGGGC
CGTGGTCGGG TCTATAGCGC TTTGGCCTTG CCCAAAGAGG CCTTTCAAGC CTACGAATAC
GCTTCCAAGC TCGACCCGAA CGATCCGGTT ACCTGGCGCA GCATGGGCTA TGCCTCGCTC
GAATTAAACC AAGCCAAGCA GGCCTTATAC TATTTCGATC AAGCGTTGAA GGTCAACCCA
CGCGATGCAC AATCGTGGTG CGGCAAAGGC CAAGCCTTCC TTGATCTCAA GAAAAACAAC
GATGCCTTGC AAGCCTACGA AAAAGCCTAT AAACTCGACG CGAATTTAGC AGAAGCCGTG
ATGGGCTTGG CCAAAGTGCG TGGCACTGGG GCATTACCGA GGTAG
|
|---|
| Protein sequence | MAILDKLLSR SDDADNLKGV EFKVGDIIDQ RYLVRNVRKG FMGLVYIARD LRSEQTVAMK
TFQAKFTWVD SAIANFTREA EVWMRLGSHP NIVEATRIVT IAGRPHIVME FVPGVSLREM
MRRGRLRFKH IVDFAIQICW GMQYAYDRCN LIHRDLKPDN VMVTPEGIAK VTDFGLAQGA
SVSTKVRWGH DSQHNESKIV THASDLFGGS QPYMSPEQRA PGTPLGTTSD IYAMGVMLYE
MMIGDLPFKA PTVAELTHLH CNVPPPTPSE VRPDLRRGCD HVILRCLAKK ANDRYQSFDE
LEHDLQWLRK YHLGEELARP TVTISLETQA ADLNAKGIVH MSLHEYSAAV KCFRQATELE
SSRATYWLNL GMSQVALLAY NDALKSYEHA LTLNPSRDEE VRLHWLAGES HEYLYQLREA
LEDYDAALNL DKKERRAWLG RGRVYSALAL PKEAFQAYEY ASKLDPNDPV TWRSMGYASL
ELNQAKQALY YFDQALKVNP RDAQSWCGKG QAFLDLKKNN DALQAYEKAY KLDANLAEAV
MGLAKVRGTG ALPR
|
|---|
| |