| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4308 |
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| Symbol | |
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| ID | 5736167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5500513 |
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| End bp | 5502171 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641281468 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001547068 |
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| Protein GI | 159900821 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGCT ACGAACGCCG TTCTCGTTTT GTTCACCGCT TTGCAACACC CCTGACCACG
CTGAATGCGG GGTTGGCGTT GCTTGAGCGT TATTTAGCTG AAAGTAATGC CAACTCGGCC
CAAATTGCTG AGGTGATGGG CTTGCTCAAT CGCTCGGCAA CCCGTTTGGG CAGTGCGATT
GATGTGCTGC AAGAATATAT GTTTGATCAC CCAACTGGCA TTCAGGTGAT TATTCCCGAT
GAGGTGCTGG CGCAGCGCCC ACAGCATCCA GTTCAAACGC CTACCGAACA GCCCAATTTG
GCCTTACCCA AATATCCGCC CGATATCGAC ACCAGCAAAC CGTGTGTCTT GCTGATCGAA
GATTCGCAAA CCTATCGCGC AGTGGTTTCC GCACGTTTGA CCCAATCGGG CTATAACGTG
GTAACCGCTC CCGATGGCAT GGCTGGCTTA GATTTGGCGC GGGCTTATCA ACCAGTGGCG
ATTATTCTCG ACCTGATGTT GCCCCACCTC AATGGCGAAC AAGTGGCCTT TGTGCTGGGT
GAAGACCCTG AAACCAAGCA TATTCCAATT ATTATTTACA CTGGCTTAGA GGCCAAGCAA
ACCGAAAAAC TTGAGCTTGA CCCACGCCTG CAAATCATCC GCAAAGACGA AGCCTTGGAT
CGTTTGCCAA TCATGGTCAG CGAGTTGGTG ATCAAAAGCC GCAAAAAAAC CATCGCCGAG
CTTTTGGTAA TCGAAGATGA TCAAGAGATT CAGCAAGTGG TCAGCCAAGG CTTATCCAAC
GCTGGTTATT CGATTACGGT CACGACCAGC GGCGAGGAAG GCTTGCGTTT AGCCATGCGC
CAGCCTTTCG ATTTGATTAT GCTCGATTTG ATGTTGCCCG ATATTGATGG CTGGACGGTG
TTGCGCCAGT TGCGCGAACG CACGCAAACT GCGACCACGC CGCTGATGCT GGTTTCGGCG
CTGGGCAAGC CCGAAGAAAA AGTACGCGGC TTTCAGCTTG GTGCAGACGA TTATATTACC
AAGCCCTTTG ATTGGAACGA ATTGCTAGCA CGAATCAGTG CCTCGCTGCG CCGCCGCGAA
GTCGAAGGCA ACGCCAACCC ATCGACGATG TTGCCTGGCA ATCGGGCGAT TGAACGGGCG
ATTGCTGCTC GTTTAGATCG CAAACAGCCA TTTGTGGTTG GCTACTGCGA CCTTGATCAC
TTCAAAGCCT ACAACGATCA ATATGGCTTT CTCAAAGGCG ATGCGATTAT CCACCAAACC
GCGCGAATTA TCACTGGCGC GGTGGAACGT TCGGGAGCGG CTGGCGATTT TGTCGGCCAC
ATTGGTGGCG ACGATTTTGT GTTTCTAGCC CATCCCGACA ACGTTGTAGC GATCTGCGAA
TCAATCATTC GCGAGTTTGA TCAGCTTGCG CCCTTGTATT ACGACATCGA ATCGCGCCAA
CGCGGTTTTA TTCGCCAAAA CGACCGCGAG GGTAATCCCA AGCAATTTCC GTTTGTCAGC
ATCTCGATTG GCGTAGTTTC GAGTCTCAAC CACCAAATTA CCCACTTTGC CGAGTTTGGC
GATTTGGCCG CCGATGTGAA AAAGCGGGCC AAAGCCCATA AAGGCAGCGT TTATCTGATT
GAAACTGGCG ACAAGGCCAC TGTCAACGCC GCAGGCTAG
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| Protein sequence | MDSYERRSRF VHRFATPLTT LNAGLALLER YLAESNANSA QIAEVMGLLN RSATRLGSAI
DVLQEYMFDH PTGIQVIIPD EVLAQRPQHP VQTPTEQPNL ALPKYPPDID TSKPCVLLIE
DSQTYRAVVS ARLTQSGYNV VTAPDGMAGL DLARAYQPVA IILDLMLPHL NGEQVAFVLG
EDPETKHIPI IIYTGLEAKQ TEKLELDPRL QIIRKDEALD RLPIMVSELV IKSRKKTIAE
LLVIEDDQEI QQVVSQGLSN AGYSITVTTS GEEGLRLAMR QPFDLIMLDL MLPDIDGWTV
LRQLRERTQT ATTPLMLVSA LGKPEEKVRG FQLGADDYIT KPFDWNELLA RISASLRRRE
VEGNANPSTM LPGNRAIERA IAARLDRKQP FVVGYCDLDH FKAYNDQYGF LKGDAIIHQT
ARIITGAVER SGAAGDFVGH IGGDDFVFLA HPDNVVAICE SIIREFDQLA PLYYDIESRQ
RGFIRQNDRE GNPKQFPFVS ISIGVVSSLN HQITHFAEFG DLAADVKKRA KAHKGSVYLI
ETGDKATVNA AG
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