Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4290 |
Symbol | |
ID | 5736149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 5478175 |
End bp | 5478897 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641281450 |
Product | NUDIX hydrolase |
Protein accession | YP_001547050 |
Protein GI | 159900803 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00680151 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGAAA CTGCTGAAAA TTACGATGCG ACAAAATATG AGCGGCCTTC TGTAACGGTC GATGTGGTGA TATTTGGCTT GCGCAGTGGC CGTTTGCATG TGCTGATGGT GCAGCGGAAA CATTGGCCCT ACGCTGAACA TTGGGCGATT CCAGGTGGCT TCGTCAACAT GGATGAATCG TTGGAAATGG CTGCTCGGCG CGAGTTGGAG GAAGAAACAG GCGTTCACGA TGTGTATATG GAGCAGCTGT ATACTTTTGG TGATCCTGGG CGCGACCCAC GAACCCGCGT GATTAGTGTG GCCTATTTTG CCTTAATTCG TACCGAAGAG CAAGCCTTGC AAGTTTCCGA CGAATCGAAT GATGTTTGTT GGTTTCCGGT CGATGAACTG CCCAAGGACT TGGCCTTCGA TCATGAAAAG ATTCTGCGCT TTGCAATCGA TCGCTTGCGC TCAAAGCTGG AATACACCAC TTTGGCCTTT CAATTGCTCC CCAAGGAATT TAGCTTGCCC AAACTCAAGC GGATTTACGA AGAGATATTG GGCGAGCAGC TCGATAAAGC CAATTTCTAT CGCAAACTGC GTGATTCCGA TTTGCTCGAA GATACTGGCA AATTGCTGAA TAGCCGAGGC CGACCAGCTC GCCTCTATCG CTTCCGCGAT TCACGCATCG AGGGCGATTT TGTGTTTCGC TACCGCGAAG CCAAAAAGAA GGACGAACAA TAA
|
Protein sequence | MTETAENYDA TKYERPSVTV DVVIFGLRSG RLHVLMVQRK HWPYAEHWAI PGGFVNMDES LEMAARRELE EETGVHDVYM EQLYTFGDPG RDPRTRVISV AYFALIRTEE QALQVSDESN DVCWFPVDEL PKDLAFDHEK ILRFAIDRLR SKLEYTTLAF QLLPKEFSLP KLKRIYEEIL GEQLDKANFY RKLRDSDLLE DTGKLLNSRG RPARLYRFRD SRIEGDFVFR YREAKKKDEQ
|
| |