Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4266 |
Symbol | |
ID | 5736120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 5441055 |
End bp | 5441879 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641281421 |
Product | RDD domain-containing protein |
Protein accession | YP_001547026 |
Protein GI | 159900779 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000560964 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGATA ATCGTGGAAG TGATCGCTAT ATTATTGATA CTCCCGAAAG TATTGAGTTT GGCTATGATG TGGCTGGAAT CGGCACACGC TTTGTGGCGG CGGTTATCGA TACGGCCTTC TTCTCAATTT TGTTATTTAT TGCGCAACGG GTCTATATCG GGACTGATAA CAATCCCAGC GATGCTGCCT ATCGGATTTT CTTTTTCTTC TGTATTTTTA CAGTCTTGGT TTATTATATC GCCTTTGAGC GCTTTTGGAA TGGGCAAACG CCTGGCAAGC GGCTTTTGGG GATTCGGGTG GTGCAAGAGG CTGGCAAGCC ATTAACCTTC ACTGGTAGCT TGATTCGGAA TTTACTGCGG TTAATTGATT TTGTGCCAGC GTATTATTCA ACTGGGTTGC TCACGATGTT GATCGATAAG CGTGCCCGCC GTTTGGGAGA TTTGGCTGCT AGCACGTTTG TGGTGCGCGA TCGCCAACGG GTGACGCTTG AAATGTTGTT GCAATCGACC CGCGATGATA AAGTTGCGAG TGCGCTCAAA GATAGTGGTG CAACCTTGCC CAATATTACT GCCTTACGCC CAAGCGATAT GGATTTAGTG CAAAACTTTT TGCTGCGCCG TGCTGTTTTA GCCCCCGATC GACGCTTGCG GATTGCAACT CAATTGGCTT ATGCGCTGTT TGGACGGCTT GGCTACAGCG TGCCTGGTGA TCCTGAGCAG TTTTTGCAAC AAGCTAGTGA TCAGTATGTA TTGGTGCGTG CTCAGGCATT GCAAGCAGCT CCTGCACCTG TGCCAGTAAA TCCGTATGAC GGGCATCGAG GCTAA
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Protein sequence | MIDNRGSDRY IIDTPESIEF GYDVAGIGTR FVAAVIDTAF FSILLFIAQR VYIGTDNNPS DAAYRIFFFF CIFTVLVYYI AFERFWNGQT PGKRLLGIRV VQEAGKPLTF TGSLIRNLLR LIDFVPAYYS TGLLTMLIDK RARRLGDLAA STFVVRDRQR VTLEMLLQST RDDKVASALK DSGATLPNIT ALRPSDMDLV QNFLLRRAVL APDRRLRIAT QLAYALFGRL GYSVPGDPEQ FLQQASDQYV LVRAQALQAA PAPVPVNPYD GHRG
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