| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4246 |
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| Symbol | |
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| ID | 5736100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5417242 |
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| End bp | 5418489 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641281401 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001547006 |
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| Protein GI | 159900759 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000179551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCAA CATCGACTAC CCCGCGCCAA CCCTCGCCGT TGGTCGCTTT ACGCCACCGC
GATTATCGGC TGCTCTGGAG CGGCCAACTG ATTTCAATTG CTGGCTCGCA GATGCATACC
GTAGCGTTGC ACGTTCAAGT TTATCGTTTA GCTAGCGCGA TTCCTGGGGC TAATCCAGCG
ATTTTTCTGG GCTTGATTGG CTTGTTTCAG TTTATTCCCT TGCTGTTGCT GGCGTTACGT
GCAGGTCTAT TGGCCGATCG AGTTGATCGA CGACGTTTGA TGCTGGTAAC ACAAAGTATC
TTGATGGGGT TATCGTTGGT ATTGGCGGTT TTATCGTGGT TTGGCTTAAT CAATCTGTGG
TTGCTGTATG GAATTATGAT TATCTTTTTC AGCACCAAAA CCTTTGATTT ACCAGCTCGC
CAAGCGTTAA TTCCGCGTTT AGTGCCGCGT GAAGTACTGC CAACAGCATT AAGTTTAAAT
ATGATTGCTT GGCAAATTGG CAATATTGCT GGGCCGGCCT TGGGTGGTTG GTTTGTTAGC
TATTCAATTG CCTTGGTCTA TTTGATCGAT GCGATCAGTT ATGGCGTGGT GGTATTGAAT
TTGTGGCAAA TGCGCGGCAA TTATGCCCCA ACCGAGGTTA AACCAATAAT CAAAGGCTCC
ATGTGGGAAG GTTTGCACTT TGTACGGCGC ACGCCGATTA TTTGGTCTAC CATGGTGCTC
GATTTTATTG CCACCTTTTG TGGTGCTGCC ACGACCCTCT TGCCCTTATT CGCTGATAAA
GTCTTAAAGG TTGATGAAAA AGCCCTCGGT TTGATGTATG CAGCACCAGC AATTGGCGCG
TTAGTAGCCG CCCTCGCCAT GTCGTGGTTT GGCAATCCGC GCCGCCAGGG CATGGTTGTG
GTGGTTTCGG TGGTGCTCTA TGGCTTGGCG ACCATGGTGT TTGGGCTAGC TCCAAGCTTA
CCAATTGCCG TGCTGGGCTT GGCGGGCACA GGTGCAGCTG ATACGGTCAG TGCTGTCTTG
CGCGGCACAA TTCGCCAATT AAACACCCCC GACGAGCTGC GTGGGAGAGC AACCTCGGCC
AATATGCTGT TTTTTCAAGG CGGGCCATTG CTAGGCGAGG TTGAAGCTGG CTTCGCTGCA
TCATTGGTTG GTGCGCCAAT CGCTATCGCT TTTGGTGGCG CGATTTGTGT CGCCGCCGCA
ATCATCATTG CTGTGCGGAT ACCCAGTTTA CGCTTGTACG ATCGTTGA
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| Protein sequence | MASTSTTPRQ PSPLVALRHR DYRLLWSGQL ISIAGSQMHT VALHVQVYRL ASAIPGANPA
IFLGLIGLFQ FIPLLLLALR AGLLADRVDR RRLMLVTQSI LMGLSLVLAV LSWFGLINLW
LLYGIMIIFF STKTFDLPAR QALIPRLVPR EVLPTALSLN MIAWQIGNIA GPALGGWFVS
YSIALVYLID AISYGVVVLN LWQMRGNYAP TEVKPIIKGS MWEGLHFVRR TPIIWSTMVL
DFIATFCGAA TTLLPLFADK VLKVDEKALG LMYAAPAIGA LVAALAMSWF GNPRRQGMVV
VVSVVLYGLA TMVFGLAPSL PIAVLGLAGT GAADTVSAVL RGTIRQLNTP DELRGRATSA
NMLFFQGGPL LGEVEAGFAA SLVGAPIAIA FGGAICVAAA IIIAVRIPSL RLYDR
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