| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4181 |
|---|
| Symbol | |
|---|
| ID | 5736043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 5332317 |
|---|
| End bp | 5334020 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641281336 |
|---|
| Product | carbohydrate kinase, YjeF related protein |
|---|
| Protein accession | YP_001546941 |
|---|
| Protein GI | 159900694 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAA TTGTGCCTGG GTATCACATT ACAACCGCTG CCCAAATTCG GGCAATCGAG
CAACATGCTG TTGACGAAGG GGCGACGTGG GCTGGCCTGA TGGCCGAGGC TGCACGCGGC
ATGGCCGATG TTGGATTAAC CGTGATCGCC AAGCAAACCA ACCCCAGCGT GTTAGTGCTG
GTTGGTTCTG GCAACAATGG CGGCGATGCT TTGGTGATTG CACGGCATAT CAAAGAGGCT
GGCTTTCCAG TCACCTGCTA TCTATATAAA CGCAAGCCGC ACGCTGATGA TTGGCCGTTT
GCTGCTGCCC AAGCCGAAGC CATTCCAATG ATCTTCGCTG CTGATGATCC ACAAAATCAG
CAACTCCAGC AACTGTTGCA AACCAACACA TTCATCATTG ATGGGTTGTT TGGCATTGGC
CTGAGTCGTT CGTTGGCGGC TGAGGTAGTC CAAATTATCG ATTTGGTCAA TGCCAGCAAA
TTGCCAGTTT TGGCAGTCGA TGTGCCTTCG GGCCTTGATG CTGACAATGG CAAGATTTGG
GGCACAATCA TCAATGCTGC CTACACCGTA GCGGCTGGCC TAACCAAACG CGGCCATCAT
TTGTACCCAG GTGCGGCCTA TGTTGGCAAA TTGGCAATCG CCCCCTTTAC CCTACCAGAT
TCTATGGAGG AGCCGATGAC TACAACTGAA CTGAATCTTG CGACAATCCG TTCGCTGGTG
CCGGCCCGTC CGGTTGATGG CCATAAAGAT ACTTTCGGGC GCGTGATGGT TGTGGCTGGC
TCGTATCTCT ATCCTGGCGC GGCTTGGCTT GCGGCCACGG CGGCGGCTCG TTCGGGTGCT
GGGGTAGTAA CCTTGGCTTG CCCACGCTCA ATTTATGGCA GCACCGCCGC CCATCTGCAT
GAAGTAACCT ATTTGCCGTT GCCAGAAGTT GAACCAGGCG AGTTGACCGA AGCCGCTGCT
AAGTTGGTGC ACGAAAAACT AGCCAAATAT AAAGCCTTGC TGGTTGGACC AGGCCTTGGC
ACCGAAACAG GCACTGGCGA TTTTCTACGG GCGCTGATTG GCTTGGCCTC AAGCAAACGT
CGGTTAGGCG TAGGTTTTCT TGGCTCAAGC GAGCTTGAGT TGCCGACCAA ACGCAAAGGC
GGGGTTGGTT TCGGCCTAGC TGCTCGGCCC AAAGAAGAAG CAAAGGCTGA AGAAGATGGC
CCAGTCGTGC TGCCACCGCT GGTTATCGAT GCCGATGGCT TGAATATTTT GGCCACAATT
GAACATTGGG AAGAAAAATT ACGCGATCAG CCTGTCGTGC TCACACCACA CATCGGCGAG
ATGGCCCGCT TGTTGGGCGA AGAAAAAATC GGTGAAGATC ACCCACAAAT TGCACTCGAA
GCGGCAGCCC GCTGGGGCGT GACCGTGGTG CTGAAATCGG CCCACACAAT TATTGCAAGC
CCTGATGGCC GCTTGGCGTT GCATGGTTTG GCTAACCCAG CATTGGCAAC CGCCGGATCT
GGTGATATCC TTGCAGGACT AACTGCTGGC TTGATGGCAC AAGGCTTAGC CCCATTTGAA
GCCGCCCAGC TTGCAGTTGG CGTGCATGGC GTTGCAGGCG CTCTGGTTCG TGAAGAACTC
GGCGAACGCG GCACCATTGC TAGCGATATT CTTAATCGCC TGCCCTTAGC ATGGCGAAAA
CTTACAGAAG GCGGATTAAA ATAA
|
|---|
| Protein sequence | MPKIVPGYHI TTAAQIRAIE QHAVDEGATW AGLMAEAARG MADVGLTVIA KQTNPSVLVL
VGSGNNGGDA LVIARHIKEA GFPVTCYLYK RKPHADDWPF AAAQAEAIPM IFAADDPQNQ
QLQQLLQTNT FIIDGLFGIG LSRSLAAEVV QIIDLVNASK LPVLAVDVPS GLDADNGKIW
GTIINAAYTV AAGLTKRGHH LYPGAAYVGK LAIAPFTLPD SMEEPMTTTE LNLATIRSLV
PARPVDGHKD TFGRVMVVAG SYLYPGAAWL AATAAARSGA GVVTLACPRS IYGSTAAHLH
EVTYLPLPEV EPGELTEAAA KLVHEKLAKY KALLVGPGLG TETGTGDFLR ALIGLASSKR
RLGVGFLGSS ELELPTKRKG GVGFGLAARP KEEAKAEEDG PVVLPPLVID ADGLNILATI
EHWEEKLRDQ PVVLTPHIGE MARLLGEEKI GEDHPQIALE AAARWGVTVV LKSAHTIIAS
PDGRLALHGL ANPALATAGS GDILAGLTAG LMAQGLAPFE AAQLAVGVHG VAGALVREEL
GERGTIASDI LNRLPLAWRK LTEGGLK
|
|---|
| |