| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4109 |
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| Symbol | |
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| ID | 5735970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5246700 |
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| End bp | 5248133 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641281263 |
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| Product | PucR family transcriptional regulator |
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| Protein accession | YP_001546869 |
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| Protein GI | 159900622 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.222567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAACTC TATATGAAAT TTGGCGCTTG GCCTTACCAC CAACAACCAG CTTGCGAGCT
GGCGAGGCCA ACACCCTTGC AGTGCGGGCA GTTGTGCTGG CACGTCCGAC CCAACCAGCG
CTGCCCGACC TTGCTGGCTC CGAAGTTGTG CTCGTTAGTA CAACCGTCTT GGATTCGTTG
CGGCTTTCGT TGGCTCGCTT GATTGAGCGC TTGAACGGGA CTTCGGTGCT GGCGGTTGGC
CTCACCGGAA TGGTTGATGA ACGAGCAGTA GCGGCGGCGG AAACCGCTAA TATTACCTTG
TTTGAATTGC CACATAACGC CGATTTGCGC ATGGTACAAC GTGAAAGCGA GCGCTTACTT
TCCGATCCCG AGGCACAATA TGAGCGTCGT GCGGCGCAAC TTTATAGTGC TCTAACCACG
AATGGCCTGA GTGAAGGCCG CACAACGCTT TTACGCATGC TTGAACTCTG GACTGGCCAT
AGTGTGGTTT TTCCGGCTGA TGCGGGGATG CCCACCACCG TACCAGTGCT GCTTGATGGC
CATCGCGTTG GTTTTTTGGG CAGTATTGGC AGCCATCCGT GGGATGCAGG GGCGCTCGAA
CAAGGCTCAG CCGCATTATC GTTGCTGCTC GATAAAGAAC GGGCAATCGA AGCCACCGAG
GATCGTTTGC GCGGCAGCGT GCTTGAATCG TTGCTGGCAG GGATTCCCTT GGATGTTCCT
GGGCAACGGC GGGCAGCGGA GCAAGGCATT TTGCTCGATT CAGCCTATGC CCTAGCTGCT
TTACGCCCGC AAGATTCCTT GCAGATCGAT CGGGTGATGG CGGCAGTGCG CCGAGCCTGC
GATCGCTTGC GCTATCCAGC GTTTATTGCT GATCACGATG GAATTATTGT GCTGGCCATG
CCGATCGATA GCCTTGATAA TCCTGAGCAG CGTTTGCGTG AAGTGCATAG TGCTTTGCAT
GAAGCCAGTT GGGTACTTGA TGGCGGCTTT GGCATTGCTT CGGAAAACGG TGCATGGTCG
GGGGCTTGGG CCGAGGCAAT TGGTGCATTA CGGTTGGGCC GCGAATTACT AGGGGCAGGC
GTGTTGGCTG GCGGAGCCGA ATTAGGCGTT TATCGGCTAC TACTGAGTGT GGCAGACTCA
GCTCGTGCTA GAATGTTTTA TGATCGGACG ATTGGCCCAT TAGCTGCCCA CGATGCCAAA
CAAGATGGCG ACCTGTTGTA CACCCTACAA ATGTTCTTTG CCTATCTTGG CAACCATAGT
CAGGCCGCAG CAGCGCTGCA TATTCACCGT AATACCCTCC TCTATCGGCT CGGTCGAATC
GAAAATATTA CATCGCATCA TCTCGACCGT GCGCCTGATC GGTTGGCATT ACAGTTGGGT
TTAGCCCTTC ATCGCATCTA TCAGAGCCAA AAGCCTGATC TAAAAAAGGC GTAG
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| Protein sequence | MATLYEIWRL ALPPTTSLRA GEANTLAVRA VVLARPTQPA LPDLAGSEVV LVSTTVLDSL
RLSLARLIER LNGTSVLAVG LTGMVDERAV AAAETANITL FELPHNADLR MVQRESERLL
SDPEAQYERR AAQLYSALTT NGLSEGRTTL LRMLELWTGH SVVFPADAGM PTTVPVLLDG
HRVGFLGSIG SHPWDAGALE QGSAALSLLL DKERAIEATE DRLRGSVLES LLAGIPLDVP
GQRRAAEQGI LLDSAYALAA LRPQDSLQID RVMAAVRRAC DRLRYPAFIA DHDGIIVLAM
PIDSLDNPEQ RLREVHSALH EASWVLDGGF GIASENGAWS GAWAEAIGAL RLGRELLGAG
VLAGGAELGV YRLLLSVADS ARARMFYDRT IGPLAAHDAK QDGDLLYTLQ MFFAYLGNHS
QAAAALHIHR NTLLYRLGRI ENITSHHLDR APDRLALQLG LALHRIYQSQ KPDLKKA
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