| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4059 |
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| Symbol | |
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| ID | 5735917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 5182827 |
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| End bp | 5184755 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641281210 |
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| Product | VanW family protein |
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| Protein accession | YP_001546819 |
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| Protein GI | 159900572 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.40506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGTA GTATGGCCGC AGTTGCGCCG AACCCTCAAG CGCTGGCTTG GGCGAGGGCT
GGTTTGTTGG CAATCAAATA TGGGCGTTAT CGTGATAGTG CTGCTTTATT GACTCGCGCA
GTTAAGCTTG ACCCAATGTT GGGCGAGGCT TGGCGCTGGT TGGGCGCACT GCATAGCGGG
CAACGTCAAG CCTATTGTTT GCGTTGGGCA CAACGATCAT TGCCGAGTGC CACCATTCCG
CGCTTGCCGA GCGTCGTCGC GGCACCTATA GCGCCAGTTC GCAGCAAAGC CAAACCGCAA
CGCCGAGGCA ATTGGCGCAA AGTTGCCCGT TGGTCGAGCG CCGCTGCCCT AGCCGCCTTG
CTTGGTTTTG GTGGTTTTCA GGCGGCCTAC GCCAATCGGG TTTATCCTGG CATTCAGGCT
TTTGGTCAAT CGCTGAGTGG CTTGACCAGC AACGAAGCCG CCCAAGCGAT TTTGCCAACC
TTGCAAGCTT GGAACAATCA TCATTTTAAA GTGCAATTGG GCGATCAAAC CGCGATTGTG
CCATTTAATG CCTTGACGAG CTTTGACCCT CAAGTGATTG CTGAGCGAGC GTTGCAAATT
GGCCGCGAAG ATTCGTGGTC GCAGCGCTTG AGCAACCAAA GTTTAGGAAT TGTCGGGACG
ATTAAGGCCG ATGGCTTATT GCTCAATCAA GCCTCACTTG ATCAGGCCAT CCAAACCTTG
GCTGAAGCTA GCGATCGTTC TGCCGTCGAT GCACAATTTC AGCACAATGC CAATGGTGCT
TGGGCGGTCA GCAACGATGT GATTGGCCTC AAACTTGATC GTGATCAAAC CAAAGCGGCT
TTCCAAGCCG CATGGGACAG CATTGATTGG GCAGCTGCGC CGCATGATTA TGAAGTGGTG
GTCGTGCAAC AGGCCTTACA ACCGCAGCAA AAAGCCACTG AGCTTAATGC GCTGTTGCCA
ACCCTCAATC AGCAAACTGC TGCTCCGTTG ATCATTACGA TCAAGGGTAA CGAGCATCAG
TTTGATCGCA CGAGCTTGCT CGATTTACAT AGATTACCGC AAGCAGGCCA ACGTTTTGGC
AATAATGATG CTGCAATCAA AGCAATTGTG CAGGAATTAG CTCAAAACTA TGATCAACCC
GCCCAAGCCT CGCGGCTGGT GCGCAACGGC AATCGCGCGA TTGAATGGCA ATTTGGTCAA
ATTGGCTACA CGCTTGATCA AGCGCAACTG CAAACTCAAA TTGGCCAAGC CCTGAACACC
GCCAATAATG CAGCCTTGGA TTTCTCGTTG CATGAAACTG TGCCACCTGC TGGTGAGCTT
GAAGCCTTGG GGATTTATCA AGTGATTGGG GTTGGCGCAT CAGATTTTAG CTCCTACCCC
GATTACAACC GTGATCGCAA TGTTGACGTT GGTGGCAAGG AATTTGATGG TCTATTGATT
GCTCCTGGTG AAGTGGTATC GTTTGGTGGT ACGGTTGGCG ATATTTCGCT GGAAAAAGGC
TACCAAATTG GCGAGATGAT TGAAAATGGC GTGGCTGTGC CAAGCATTGG CGGTGGCATT
TGCCAAGTTT CAACGACGCT ATTTCGCGCG GTATTTTGGG CGGGTTTGCC AATTGAGGAG
CGCCACAACC ATAGCTGGCG TTTGGCTTGG TACGAAGTTG ATGCGCCCGC AGGCATGGAT
GCGACGATCG CCTTGGGCGG GCCAGATCTC AAATTTCGCA ACGATACCAA TGGCTATATT
TTGATTGATG TTGAAACCGA TCTGGTTAAG AAAAACCAAA CTTTTACCTT ATATGGCAGC
GACACAGGCC GCACGGTGAC GATGGAAGCA ACCGGCAATG GCTGGAATTT CTTCCAAATT
TTTCGTACTA TTACTGAGCG CGATGGCATA AGCCGCAGCG ATCGTTGGGA TAGCTATTAT
ACGCAGTAG
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| Protein sequence | MMSSMAAVAP NPQALAWARA GLLAIKYGRY RDSAALLTRA VKLDPMLGEA WRWLGALHSG
QRQAYCLRWA QRSLPSATIP RLPSVVAAPI APVRSKAKPQ RRGNWRKVAR WSSAAALAAL
LGFGGFQAAY ANRVYPGIQA FGQSLSGLTS NEAAQAILPT LQAWNNHHFK VQLGDQTAIV
PFNALTSFDP QVIAERALQI GREDSWSQRL SNQSLGIVGT IKADGLLLNQ ASLDQAIQTL
AEASDRSAVD AQFQHNANGA WAVSNDVIGL KLDRDQTKAA FQAAWDSIDW AAAPHDYEVV
VVQQALQPQQ KATELNALLP TLNQQTAAPL IITIKGNEHQ FDRTSLLDLH RLPQAGQRFG
NNDAAIKAIV QELAQNYDQP AQASRLVRNG NRAIEWQFGQ IGYTLDQAQL QTQIGQALNT
ANNAALDFSL HETVPPAGEL EALGIYQVIG VGASDFSSYP DYNRDRNVDV GGKEFDGLLI
APGEVVSFGG TVGDISLEKG YQIGEMIENG VAVPSIGGGI CQVSTTLFRA VFWAGLPIEE
RHNHSWRLAW YEVDAPAGMD ATIALGGPDL KFRNDTNGYI LIDVETDLVK KNQTFTLYGS
DTGRTVTMEA TGNGWNFFQI FRTITERDGI SRSDRWDSYY TQ
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