| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4029 |
|---|
| Symbol | |
|---|
| ID | 5735890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 5143906 |
|---|
| End bp | 5144652 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641281179 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001546789 |
|---|
| Protein GI | 159900542 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.218483 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCTA GTGCAAAACC GCTTGCAATT CACGATTTAA CTGTGGCCTA CCAAGATAAG
CCGGTGTTGT GGGATATTGA TTTGAGTGTG CCAACGGGCG TGTTGGCGGC GATTGTTGGG
CCAAATGGCG CAGGCAAATC AACCTTGATC AAGGCGACAC TTGGCTTGAT GCCCGTGGCG
GCTGGTACGG TCGAGATGTT TGGCCAGCCC TATGCCAAAG CACGCCGGAT GGTTGGCTAT
GTGCCACAAC GCTCCAGCGT CGATTGGGAT TTTCCGACTA ATGCCTTGGA TGTGGTGTTG
ATGGGAACCT ACGGCCAACT CGGTTGGATC AAACGACCCA GCAAAGCCGA CCGCGAATGG
GCGCTGCATT GTTTAGAGCA ACTGGCCATG GCCGATTTTG CCCAACGCCA AATTAGCCAG
CTCAGCGGCG GCCAACAACA ACGGGTCTTT TTGGCCCGCG CTTTGGCCCA ACGTGCCCAA
CTTTATCTGA TGGATGAGCC GTTTGTCGGC GTGGATGCCG TGACCGAACG AGCGATCATC
AGCCTATTGC AACAACTGCG CTCGGACGGC AAAACCGTGA TCTGCGTGCA CCACGACCTT
GATTCAGCCC CCGAATATTT TGATTGGGTG GCCTTGTTGA ATGTACGCAT GATCGCTGCT
GGTCCGATGA AAACAATCTG GACACCCGAG AATATTAGCC AAACCTATGG TGGCCGAACC
CAAAGCCTGA TTCGAGGTGC TGCATGA
|
|---|
| Protein sequence | MNASAKPLAI HDLTVAYQDK PVLWDIDLSV PTGVLAAIVG PNGAGKSTLI KATLGLMPVA
AGTVEMFGQP YAKARRMVGY VPQRSSVDWD FPTNALDVVL MGTYGQLGWI KRPSKADREW
ALHCLEQLAM ADFAQRQISQ LSGGQQQRVF LARALAQRAQ LYLMDEPFVG VDAVTERAII
SLLQQLRSDG KTVICVHHDL DSAPEYFDWV ALLNVRMIAA GPMKTIWTPE NISQTYGGRT
QSLIRGAA
|
|---|
| |