Gene Haur_4028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4028 
Symbol 
ID5735889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5142989 
End bp5143909 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content53% 
IMG OID641281178 
ProductABC-3 protein 
Protein accessionYP_001546788 
Protein GI159900541 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATCT TAGATTTATT TCGCGATTAC ACCTTGCGCA ATGTGGCCTT GGGAGCCATG 
GTCTTAGGCA TTGTCAGCGG CATTTTGGGC TGTTTTGCGG TCTTGCGTCG CCAAGGTTTG
CTAGGTGATG CGCTCTCGCA TGCCGCTTTG CCAGGCATTG CCATCGCTTA TTTATTGACT
GGCTCCAAAG CGCCGATTGT GCTCTTGCTG GGGGCGGGCA TTGCTGGTTG GGTTGGCACG
CTGGTAATCA ATCGCATTGT GCGCGATACG CGGATTAGCG AAGATAGCGC CTTGGGGATT
GTGCTGAGCG TCTTTTTTGG GGTTGGGATT TTGCTGCTGA CCTATATTGC CAAGCGCAAC
GATGCCAACC AAGCTGGGCT TGATCGCTTT TTGTTTGGCC AAGCAGCGAC CTTGGTTGCT
ACCGACGTGC TAACGATGAG CATTTTGGGT GGTTTGGCAC TGGGCTGTTT GGTGTTGCTG
TATAAAGAAT TTAAGCTATT GGCGTTTGAT CCCGCCTTTG CCGCCAGCCT TGGTTTTCCA
CCCAATCGGC TGGGCATTTT GCTCACCAGT TTGATTGTGG TGGCAATCGT GATTGGCTTG
CAAACGGTGG GTGTGGTGTT GATGGCGGCG ATGTTGGTGG GGCCAGCGGT TGCAGCGCGT
CAATGGACGC ATCGATTAAG CGTGATGTTG GTGCTGTCAG GCGTGTTTGG CGCAAGCGCA
GGCATCGCCG GAACCATGCT GAGCCTTGGG CAACAGCATG TGCCAACTGG GCCAATGATT
ATCCTGAGCT TAACCGCAAT TGTGACTATT TCACTCTTGT TCGCGCCAGC CCGTGGCTTG
GTTTGGGCGA AAATCCGTCA AAACCATTCG CTGAACAACG AGCCACGTAA CCGCGAAATT
CAGCCAGCCA AAGGAGAATA A
 
Protein sequence
MSILDLFRDY TLRNVALGAM VLGIVSGILG CFAVLRRQGL LGDALSHAAL PGIAIAYLLT 
GSKAPIVLLL GAGIAGWVGT LVINRIVRDT RISEDSALGI VLSVFFGVGI LLLTYIAKRN
DANQAGLDRF LFGQAATLVA TDVLTMSILG GLALGCLVLL YKEFKLLAFD PAFAASLGFP
PNRLGILLTS LIVVAIVIGL QTVGVVLMAA MLVGPAVAAR QWTHRLSVML VLSGVFGASA
GIAGTMLSLG QQHVPTGPMI ILSLTAIVTI SLLFAPARGL VWAKIRQNHS LNNEPRNREI
QPAKGE