| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4018 |
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| Symbol | |
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| ID | 5735879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5125407 |
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| End bp | 5127068 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641281168 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001546778 |
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| Protein GI | 159900531 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.112501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGAA TATTGACCCT AGGATTATTG GCTGTTTTGC TCACAGCATG TAGCCTCGGC
TCCACACCAG CACCCACCAA CGAGCCAACC ACACCGCCAA TTCAGGTTCC GCAAGGTGGT
ACGTTAACCA TTCGCACGGC CCAAGATATT GCAGCTTTGC ACCCGTGGAA ACCAACCTGC
CACGAAGAAG CTCAACTTTT AGGCCTGCTC TATCGTGGTT TAACTAAGCT TGATCAAAGC
CTCGCTCCGC AACCTGATGT TGCTACAAGC TGGCAAAGCG ATAGTATCGG CCAAACCCTG
ACCATGACCT TGCGCAGCGA TATTCGTTGG CATGATGATA CGACCTTGAC TGCTGCTGAT
GCGGCTTGGA CGATCAGCGC CATGCAAAGC ATCAGCCCAA CCACGCCATT ATTGACCGAT
CTTCAGGGCT TGGTGCGCAA GGTTACTGCA CCCGATGACA CAACTTTGGT CATTTCGTTG
CGCGAACCCT ATGCGCCATT GCTCTCGGCC TTGAGCATGC CAATTTTGCC CAAACATGTG
TTTGAGCAAT TAAGCCCAGT TGAGCTTGAT CAGCTTAATC TTTTGACGCA GCCAATTGGT
AGCGGCCCGT TTATGTTCGA GCAACGGACT GCTGGCTCAG CAATTAGCTT AATTCGCAAT
AGCAACTATA TCGATGGCGT GCCCTATCTC GATCGGGTGG CCTTTGTGGT TGCCCCCGAT
CCGCAAGTGG CTCGCCAAGC AGTGCGCGAT GGAGATTTAT TGGCAGCAGA ATTGCCATGG
GCACAAAGCC AAGGCTTAGG GCCAACAGTT GGCATAGGTA GTTATCCTGA AAATGGTTTT
TATTATTTGG CCTTTAATAT GCGTGATGGT CGCATCTTCA GCGATCAGCG AGTGCGCCAA
GCGCTGGCAT TAAGCCTCGA TCTCAATACA ATTGTCGAAA CCGCTGGCCC AGCCGCTCAA
GCAATTTTGA GCGATCATTT GCCTGGCACA TGGGTTGCGC CAACTGGTGA GTTGCCCAAA
CGCAACTTAG ATCAAGCTCG CGAATTACTG GATCAAGCAG GCTGGGTCTT GCCCGAAGGT
GCGACAATTC GCGCCTCGAA CGGGATTACG CTGTCGATGG CGCTGTTTGT GCGGGGCGAT
GACCAACGCC GCATCGAGGT TGCCGAACGG ATCGCCGCTG CTACACGTCC GGTTGGCTTC
AATATTGTGG TTACGCCAGC CGATTTCGAG AGCGTGATTC GCTCTAAATT GGTAACACCC
TTTGATTTTG ATTTGGCTTT GATGAGTTGG GGCAATAGTC GAGTTGGTGG TTCGCCCTCG
TATACCGCCT ACGATCCTGA TAATTTCTCG TTGTTTCATT CGAGCCAAAT TTACCAAGGG
GTTGCCGATG GACGGCCTGG CCTGCGCAAT TATGGTGCGT TTCAAAACAC CAGTTTCGAT
AATTTATCGA CGGCAGCGCG GGCACTTTAC GCAACTGAAC GCCGCCGCGA ACTCTATCAA
CAAACCAACA CAATCATTCA AACCGAATAT CCGTATGTGT TTCTGTGGGC CGATCGGATT
CCGGTCGCCT TAGCCAAACA GGTGCGTTCA ACTCAAGGCG AAATTCGGTT GGATACGGCC
AATTGGCTGT ATGATGTTCA ACATTGGTAT CTTGAGCAAT AA
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| Protein sequence | MMRILTLGLL AVLLTACSLG STPAPTNEPT TPPIQVPQGG TLTIRTAQDI AALHPWKPTC
HEEAQLLGLL YRGLTKLDQS LAPQPDVATS WQSDSIGQTL TMTLRSDIRW HDDTTLTAAD
AAWTISAMQS ISPTTPLLTD LQGLVRKVTA PDDTTLVISL REPYAPLLSA LSMPILPKHV
FEQLSPVELD QLNLLTQPIG SGPFMFEQRT AGSAISLIRN SNYIDGVPYL DRVAFVVAPD
PQVARQAVRD GDLLAAELPW AQSQGLGPTV GIGSYPENGF YYLAFNMRDG RIFSDQRVRQ
ALALSLDLNT IVETAGPAAQ AILSDHLPGT WVAPTGELPK RNLDQARELL DQAGWVLPEG
ATIRASNGIT LSMALFVRGD DQRRIEVAER IAAATRPVGF NIVVTPADFE SVIRSKLVTP
FDFDLALMSW GNSRVGGSPS YTAYDPDNFS LFHSSQIYQG VADGRPGLRN YGAFQNTSFD
NLSTAARALY ATERRRELYQ QTNTIIQTEY PYVFLWADRI PVALAKQVRS TQGEIRLDTA
NWLYDVQHWY LEQ
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