Gene Haur_3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3916 
Symbol 
ID5735777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp4909986 
End bp4910642 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content54% 
IMG OID641281067 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001546678 
Protein GI159900431 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTGA TCGCTTTAGC CGGAGCCACG GGCTACACCG GCCAACGGAT TATCAGCCAA 
GCTGCCAACA ATTCGGAGTG GCAAGTACGG GCTTTGGTGC GCCAAAGTGC CACTAGCAAA 
ACTCATTTTC CCCTTGGCCA AGCCTTTGCG ATCTGCGATT TTGCTGATCA AGCGAGTGTT 
GAGGCAGCGC TTGAGGGCTG CGAGGCGGTA TTTCAAACGA TCGGCACAAC TCAAGCTCAA 
TTTAATGCCG ATGTCAGCTA CGAAACCGTC GATTATGGCA CAACCATCGC GTTGATCAAA 
GCAGCCCAAG CGCAAGGAGT TAAACGCTTT GTGCTGCTTA GCTCGGCGGG TGCAGGCTTG 
CCGCTCGGCT CATACTTGCG CTGGAAGGCC AAAACCGAAA AAGCTGTGCG CGAAAGTGGC 
CTCGATTGGA CAATTCTGCG GCCTGCGGCG ATTGTCGGGC CAAGCCGCCG CGCAATCCAA 
CTAGCAAGCA TGCCGTTTGC GCTGCTCAGC AAATTACCTT TGATTGGGCG CTTAGGCGCA 
ATTATGCGGC CAGTTGATGT CAACGATTTG GCGTTGAGCT TTTTCAAGTG CCTCGCAGAC 
GAAACCACGA TTGGCAAAAC CCTTGAAGGT CGCTCATTCT GGCGCTTGAT TCGCTAA
 
Protein sequence
MTVIALAGAT GYTGQRIISQ AANNSEWQVR ALVRQSATSK THFPLGQAFA ICDFADQASV 
EAALEGCEAV FQTIGTTQAQ FNADVSYETV DYGTTIALIK AAQAQGVKRF VLLSSAGAGL 
PLGSYLRWKA KTEKAVRESG LDWTILRPAA IVGPSRRAIQ LASMPFALLS KLPLIGRLGA 
IMRPVDVNDL ALSFFKCLAD ETTIGKTLEG RSFWRLIR