Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3823 |
Symbol | |
ID | 5735687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 4797258 |
End bp | 4798043 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641280975 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_001546587 |
Protein GI | 159900340 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0827889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAACCA GCAAACATAA TCCAGCCATT AAGCAAATTC GGGCGTTGCG CCAACGCCGT GAGCGCGAAG CCACTGGTCT TTTTTTTATT GAAGGTATTC GCAATGTGAC CGAGGCGGTG CAAGCCCAAG CGCCGATTGA GCAATTGATC GTTGCGCCCG ACCTGTTGCG TAGCCAATTT GCCCAAGATT TAGTTGAGCA ACAGCGTCAA CAAGCCATAC CTATCCTCGA AGTCAGCGGC GAGGTTTTTG CCAGCCTTTC GAGCAAAGAT GGCCCACAAG GTTTAGCAGC AGTTGTGCGC CAGCAATGGG CCAGTTTAGC CGATGTTAGG CCCGACCAAG GCCTGTGTTG GATTGCGCTC AACGCGATTA GTGATCCTGG GAATTTGGGC ACAATTTTGC GCACTGGCGA TGCTGTTGGC GCAGCAGGCG TGATTTTATT GGGCGATTGC ACCGATCCCT ATGATCCAGC GACCGGGCGA GCTAGTATGG GAACGTTATT CAGCCAACGC TTGGTTAAGG CAACTTGGGC TGAATTTAGC CAATGGTTTG GCCAAAGTGG CTTTAATTTG GTTGGGGCGG CGGATTCAGC CAGCAGCCAC TATCGCGACT ATGCCTATCC CCAGCCGCTG ATTTTGCTGA TGGGCAGTGA GCGCGAAGGC TTGGATGCCG AGCAACAAGC CCAATGCCAA GCCTTGGTCA GCATTCCAAT GCGTGGCCAA GCCGATTCGC TGAATTTGGC GGTGGCCACA GGGGTGCTGT TGTATGAAAT TTTGGCACAG CGCTAA
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Protein sequence | MLTSKHNPAI KQIRALRQRR EREATGLFFI EGIRNVTEAV QAQAPIEQLI VAPDLLRSQF AQDLVEQQRQ QAIPILEVSG EVFASLSSKD GPQGLAAVVR QQWASLADVR PDQGLCWIAL NAISDPGNLG TILRTGDAVG AAGVILLGDC TDPYDPATGR ASMGTLFSQR LVKATWAEFS QWFGQSGFNL VGAADSASSH YRDYAYPQPL ILLMGSEREG LDAEQQAQCQ ALVSIPMRGQ ADSLNLAVAT GVLLYEILAQ R
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