Gene Haur_3823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3823 
Symbol 
ID5735687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4797258 
End bp4798043 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content53% 
IMG OID641280975 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_001546587 
Protein GI159900340 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0827889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAACCA GCAAACATAA TCCAGCCATT AAGCAAATTC GGGCGTTGCG CCAACGCCGT 
GAGCGCGAAG CCACTGGTCT TTTTTTTATT GAAGGTATTC GCAATGTGAC CGAGGCGGTG
CAAGCCCAAG CGCCGATTGA GCAATTGATC GTTGCGCCCG ACCTGTTGCG TAGCCAATTT
GCCCAAGATT TAGTTGAGCA ACAGCGTCAA CAAGCCATAC CTATCCTCGA AGTCAGCGGC
GAGGTTTTTG CCAGCCTTTC GAGCAAAGAT GGCCCACAAG GTTTAGCAGC AGTTGTGCGC
CAGCAATGGG CCAGTTTAGC CGATGTTAGG CCCGACCAAG GCCTGTGTTG GATTGCGCTC
AACGCGATTA GTGATCCTGG GAATTTGGGC ACAATTTTGC GCACTGGCGA TGCTGTTGGC
GCAGCAGGCG TGATTTTATT GGGCGATTGC ACCGATCCCT ATGATCCAGC GACCGGGCGA
GCTAGTATGG GAACGTTATT CAGCCAACGC TTGGTTAAGG CAACTTGGGC TGAATTTAGC
CAATGGTTTG GCCAAAGTGG CTTTAATTTG GTTGGGGCGG CGGATTCAGC CAGCAGCCAC
TATCGCGACT ATGCCTATCC CCAGCCGCTG ATTTTGCTGA TGGGCAGTGA GCGCGAAGGC
TTGGATGCCG AGCAACAAGC CCAATGCCAA GCCTTGGTCA GCATTCCAAT GCGTGGCCAA
GCCGATTCGC TGAATTTGGC GGTGGCCACA GGGGTGCTGT TGTATGAAAT TTTGGCACAG
CGCTAA
 
Protein sequence
MLTSKHNPAI KQIRALRQRR EREATGLFFI EGIRNVTEAV QAQAPIEQLI VAPDLLRSQF 
AQDLVEQQRQ QAIPILEVSG EVFASLSSKD GPQGLAAVVR QQWASLADVR PDQGLCWIAL
NAISDPGNLG TILRTGDAVG AAGVILLGDC TDPYDPATGR ASMGTLFSQR LVKATWAEFS
QWFGQSGFNL VGAADSASSH YRDYAYPQPL ILLMGSEREG LDAEQQAQCQ ALVSIPMRGQ
ADSLNLAVAT GVLLYEILAQ R