Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3614 |
Symbol | |
ID | 5735475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 4544123 |
End bp | 4545514 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641280763 |
Product | hypothetical protein |
Protein accession | YP_001546378 |
Protein GI | 159900131 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.529006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATAC GAGAGCATGT TGCATTAAGT GTTGCGCAAA TGGCGCAATG GGCAAGCCGC CAGTTTGGCT TTGGTGGCGG CACAAATTTG CCTGGCCGAA TTGCTCGGCG GATTGCGCCC GATGTACTGC GCCATCAAAC TAAGCGCTTA TCCGGCGGGG TGGTGTTAGT TTCAGGCACG AATGGCAAAA CTACGACCAG CCGCATGATT GCAGCAATTT GTAGCCAGCA AGGCCAACCC GCCTTGCACA ATCGCGCTGG GGCCAATTTG ATCACCGGCT TAACTGCGGC TACGCTTGAT TTAGGCATTT GGGGCCAGCC GCACTATCAA CGGGCCTTGT TTGAGGTTGA TGAAGCCCAT TTACCTGCGG CGATTGCTGA AACCCAGCCA CGGGTGGTGC TGTTGCTCAA TCTCTTCCGC GATCAGCTTG ATCGTTATGG TGAGGTTGAT ACGCTAGCCG CCAAATGGCA AAAAGTACTT GCCAGCTTGC CGAGCACCAG CACGGTCGTT TTGAATGCTG ATGATCCGGC GGTGGCCGAT TTGGCGACCG GCTTGCAAGC TCAAGTACTC TTTTATGGCC TAGAAGATCA ACGCCATGGA AACGATGCCC TGCGCCATGC CGCCGATTCG ATTTTCTGTC GGCGTTGTGG CCAGCCCTAT CGCTACGAGC CAGCCTATTA TGGCCATATT GGGCGCTATC ATTGCCCAGC TTGTGGGCAT CGGCGGCCTG AGCCAAACGT TATTTTGCGC CAATTGGAGC TCGATGGCAC GCGTGGTAGC ACATTGCGGG TGATTGCGGG GCAAAACCAA GGGCAGCAAG CTCTCGAATT AAATTTACCC TTGCCTGGGC TTTACAATGC GCTTAATGCC TTGGCCGCGA TCGCCGCAAC CAGTGCCTTG AATGTACCTT TGCCAATCAT CCGCAACGCA TTAGAGCAAT TTAGCGCCGC CTTTGGCCGA ATCGAACGCT TTGAATATCA GCAAAAATCG GTGTTGATGG CGCTGATTAA AAATCCAATT GGGGCAAGCG AAACGGTACG CATGATTACG AGCGGCAGCC AAGCACCGCT TAATCTGATG ATCGCAATCA ACGATAAAAT TGCCGATGGC ACTGATGTTT CATGGCTTTG GGATGCCGAT TTTGAAGCAT TAGCTGGCCA TACACAGCGG ATTGTCGTGA GTGGCACGCG GGCCGCTGAC ATGGCTAATC GCCTAAAATA TGCAGGAATT GACCAGCACC AATTGCAGGT AGAGCCAGAT TTGGCTCAGG CCTTTGATCT AGCAATTGCT GGCGATGAGC CGTTGACGAT GTTGCCGACC TATACTGCCA TGCTTGAAAT GCGTGAGGTA TTGGTTGAAC GAGGCGTACT CAAGCCATTT TGGGAAAGCT AA
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Protein sequence | MTIREHVALS VAQMAQWASR QFGFGGGTNL PGRIARRIAP DVLRHQTKRL SGGVVLVSGT NGKTTTSRMI AAICSQQGQP ALHNRAGANL ITGLTAATLD LGIWGQPHYQ RALFEVDEAH LPAAIAETQP RVVLLLNLFR DQLDRYGEVD TLAAKWQKVL ASLPSTSTVV LNADDPAVAD LATGLQAQVL FYGLEDQRHG NDALRHAADS IFCRRCGQPY RYEPAYYGHI GRYHCPACGH RRPEPNVILR QLELDGTRGS TLRVIAGQNQ GQQALELNLP LPGLYNALNA LAAIAATSAL NVPLPIIRNA LEQFSAAFGR IERFEYQQKS VLMALIKNPI GASETVRMIT SGSQAPLNLM IAINDKIADG TDVSWLWDAD FEALAGHTQR IVVSGTRAAD MANRLKYAGI DQHQLQVEPD LAQAFDLAIA GDEPLTMLPT YTAMLEMREV LVERGVLKPF WES
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