Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3609 |
Symbol | |
ID | 5735470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 4536729 |
End bp | 4537964 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641280758 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_001546373 |
Protein GI | 159900126 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.196503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTCAT CGATTCGTCA ACGTTTTGGC TTAGGCCTGA TCATTCTGGT GATGGTGGTG GGCAGTGCCA ATATCATTGC TCGCTGGTCA CTAGGCAAGT ATCGCACTGA TGTCGAGGCG CTGATCGATC AAACGATTCC GCAACTCGAT TCATTGTTGC GGCTGCAAAC CAGTGCCCAA GGCATCACCC AAAATACTCT CGCATTTTTG CAAACCAAAG ATGATCAATA TCTGCTTTCG CGAACTGGTT GGGTGCGCGA AACTGAGCGT TTAATTGGAG TGATGGATGG CTTAACTGAT GATACCAATC AGCCAGTTCA AGCAGCCTAT GTTGCCTTAC GCCGATCAGT TCAATCAATT ATTGAAGATA CCCAAACCTT TATTGATCGC TCTGCCACCG ACGATCCTCG CGTGATCGAA CGCCGCTTCG ACCAAGTGCG CGATTTGAAT TTATCGTTCG ATACGCGCTT CAAAACCTAC CGCGATTTAG TCACCGAAGA AGGCGTTCAG CGCCGCGCTA ATATCTCCAA TAATCCATTG CGTTATATGA ATGTGCTGGG CGTGATTGGG GTGATTGCCC TGATTGGCAT GACGATCTTA TTTCATCATA TGATCTTTAA GCCAATTCGC GCCTTACAAA AAACGGCCCA AACTGTGGCT GCTGGCGATT ATGCGCAACG GGCCGAAGTT AAACGCCTCG ATGAAATTGG CGATGTGTTT GTGGCCTTCA ACCATCTACT CGATAGCATT AACAACGAGC AGCAAGCCTT ACGCGATCAG GTTGAGCGGG TCGATCAAGC TCGTCATGAG GCCGAAATTG CCCGTAGCGA TGCCGCCGCT CAACTTGACA CCATCCAAAA TCAACGGGCA ATTATTCGCT CGATGAGTGT GCCGATTTTG CCTGTTGGCA AGCGCATGTT GGTTGTGCCA TTAATCGGCG AACTTGGACC ACAACGCCTC AAAACCCTGC AAACCAATGT GCTTGGTCGG ATCTCGACTG ACCGCCCACG CTGGATTATT ATCGATGTGA CGGGTGTGCC AGTAATCGAC AATATGGTCA GCCAAGCCTT CTCAGAACTG ATTGATAGTG TGCGACTCTT GGGCAGCGAA CCAATGCTGG TTGGCATTCG GCCCGAAGTT GCTCAAGCGC TAGTTACCAC TGGCATGAAT TTCAATAGTT TAGTGGTTGA GGCGACCTTG CAAGCAGGCA TCGCCTACGC CGAACGCCAT AGCTAA
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Protein sequence | MRSSIRQRFG LGLIILVMVV GSANIIARWS LGKYRTDVEA LIDQTIPQLD SLLRLQTSAQ GITQNTLAFL QTKDDQYLLS RTGWVRETER LIGVMDGLTD DTNQPVQAAY VALRRSVQSI IEDTQTFIDR SATDDPRVIE RRFDQVRDLN LSFDTRFKTY RDLVTEEGVQ RRANISNNPL RYMNVLGVIG VIALIGMTIL FHHMIFKPIR ALQKTAQTVA AGDYAQRAEV KRLDEIGDVF VAFNHLLDSI NNEQQALRDQ VERVDQARHE AEIARSDAAA QLDTIQNQRA IIRSMSVPIL PVGKRMLVVP LIGELGPQRL KTLQTNVLGR ISTDRPRWII IDVTGVPVID NMVSQAFSEL IDSVRLLGSE PMLVGIRPEV AQALVTTGMN FNSLVVEATL QAGIAYAERH S
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